RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ELF1P32519 619 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 PNPLA4P41247 253 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 PSMD6Q15008 389 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 PABPC1LQ4VXU2 614 aaKnown RBP15□□□□□ -0.01
CLIP3-205ENST00000592017 CEP135Q66GS9 1140 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 TPGS2Q68CL5 300 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 SCARA3Q6AZY7 606 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 METTL23Q86XA0 190 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 WDR49Q8IV35 697 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 NPAS3Q8IXF0 933 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 FGF14Q92915 247 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 TIGD1Q96MW7 591 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 CGRRF1Q99675 332 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 INTS13Q9NVM9 706 aa15□□□□□ -0.01
CLIP3-205ENST00000592017 AFF4Q9UHB7 1163 aaKnown RBP15□□□□□ -0.01
CLIP3-205ENST00000592017 ZFP37Q9Y6Q3 630 aaPredicted RBP15□□□□□ -0.01
CLIP3-205ENST00000592017 KPNA7A9QM74 516 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 PDXKO00764 312 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 NRG2O14511 850 aaPredicted RBP14.99□□□□□ -0.01
CLIP3-205ENST00000592017 RHOP08100 348 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 CFHP08603 1231 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 SRFP11831 508 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 CASP4P49662 377 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 RBP5P82980 135 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 ADCY1Q08828 1119 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 DUOXA2Q1HG44 320 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 SLC5A9Q2M3M2 681 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 CWF19L1Q69YN2 538 aaKnown RBP14.99□□□□□ -0.01
CLIP3-205ENST00000592017 ASTLQ6HA08 431 aaPredicted RBP14.99□□□□□ -0.01
CLIP3-205ENST00000592017 RNF19BQ6ZMZ0 732 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 SIX5Q8N196 739 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 FLCNQ8NFG4 579 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 ING5Q8WYH8 240 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 PGLYRP2Q96PD5 576 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 AVENQ9NQS1 362 aaPredicted RBP14.99□□□□□ -0.01
CLIP3-205ENST00000592017 WNT16Q9UBV4 365 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 SIX4Q9UIU6 781 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 FBXL21Q9UKT6 434 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 MRPS23Q9Y3D9 190 aaKnown RBP14.99□□□□□ -0.01
CLIP3-205ENST00000592017 PCDHA5Q9Y5H7 936 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 INSL5Q9Y5Q6 135 aa14.99□□□□□ -0.01
CLIP3-205ENST00000592017 ANK1P16157 1881 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 KRBA1A5PL33 1030 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 OR6C75A6NL08 312 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 PI15O43692 258 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 PRPF40AO75400 957 aaKnown RBP14.98□□□□□ -0.01
CLIP3-205ENST00000592017 CLSTN1O94985 981 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 CLCN5P51795 746 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 PTPN5P54829 565 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 WSCD1Q658N2 575 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 GUF1Q8N442 669 aaKnown RBP14.98□□□□□ -0.01
CLIP3-205ENST00000592017 LRRC52Q8N7C0 313 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 GSDMAQ96QA5 445 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 TMEM209Q96SK2 561 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 PHOX2BQ99453 314 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 PRRX2Q99811 253 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 CORO1BQ9BR76 489 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 CRISPLD1Q9H336 500 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 MFSD1Q9H3U5 465 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 DSEQ9UL01 958 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 MAFFQ9ULX9 164 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 FRMD4BQ9Y2L6 1034 aa14.98□□□□□ -0.01
CLIP3-205ENST00000592017 LRG1P02750 347 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 CYP11A1P05108 521 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 PTPN2P17706 415 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 NR2F2P24468 414 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 CCR2P41597 374 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 CDR1P51861 262 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 UBE2HP62256 183 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 GPC5P78333 572 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 PRSS36Q5K4E3 855 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 ZNF658Q5TYW1 1059 aaPredicted RBP14.97□□□□□ -0.01
CLIP3-205ENST00000592017 ISM2Q6H9L7 571 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 TRAPPC11Q7Z392 1133 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 ALYREFQ86V81 257 aaKnown RBP14.97□□□□□ -0.01
CLIP3-205ENST00000592017 SLC9A9Q8IVB4 645 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 HS6ST3Q8IZP7 471 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 CXorf38Q8TB03 319 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 GPR152Q8TDT2 470 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 TCEAL4Q96EI5 215 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 MCRS1Q96EZ8 462 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 BORCS6Q96GS4 357 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 OXCT2Q9BYC2 517 aaPredicted RBP14.97□□□□□ -0.01
CLIP3-205ENST00000592017 SLC2A4RGQ9NR83 387 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 DMAC2Q9NW81 257 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 CEP72Q9P209 647 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 CA14Q9ULX7 337 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 TRAF3IP3Q9Y228 551 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 SNX9Q9Y5X1 595 aa14.97□□□□□ -0.01
CLIP3-205ENST00000592017 LRRIQ3A6PVS8 624 aaPredicted RBP14.96□□□□□ -0.01
CLIP3-205ENST00000592017 GALR2O43603 387 aaPredicted RBP14.96□□□□□ -0.01
CLIP3-205ENST00000592017 HUS1O60921 280 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 PHACTR2O75167 634 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 CEBPBP17676 345 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 PRCPP42785 496 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 NUBP1P53384 320 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 TWF1Q12792 350 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 DUSP4Q13115 394 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 GPR17Q13304 367 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms