RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 NCANO14594 1321 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 LNP1A1A4G5 178 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 BCLAF3A2AJT9 711 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 PCNX2A6NKB5 2137 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 DPYSL4O14531 572 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 ZBTB39O15060 712 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 SEC24AO95486 1093 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 PRKCBP05771 671 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 PTMSP20962 102 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CCT6AP40227 531 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 ARPP19P56211 112 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CYP4A11Q02928 519 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CREB5Q02930 508 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 TWF1Q12792 350 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 PLD1Q13393 1074 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 PRPF4BQ13523 1007 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 CTTNQ14247 550 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 TEAD2Q15562 447 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 DCAF4L1Q3SXM0 396 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CDCA2Q69YH5 1023 aaPredicted RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 TCEAL6Q6IPX3 200 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CD300LGQ6UXG3 332 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 APBB1IPQ7Z5R6 666 aaPredicted RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 C11orf74Q86VG3 221 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 TPH2Q8IWU9 490 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 TCEAL3Q969E4 200 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 CDK5RAP3Q96JB5 506 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 PPP1R10Q96QC0 940 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 POLR3FQ9H1D9 316 aaPredicted RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 DUSP15Q9H1R2 295 aaPredicted RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 CEP72Q9P209 647 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 AFF4Q9UHB7 1163 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 HPSEQ9Y251 543 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 MSRB2Q9Y3D2 182 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 AKAP13Q12802 2813 aa11.13□□□□□ -0.63
SDF2-209ENST00000591903 ZNF638Q14966 1978 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 ASCC3Q8N3C0 2202 aaKnown RBP11.13□□□□□ -0.63
SDF2-209ENST00000591903 GCN1Q92616 2671 aaKnown RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 GOLGA6L4A6NEF3 574 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 KHNYNO15037 678 aaKnown RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 MED24O75448 989 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 MYL1P05976 194 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 GJA1P17302 382 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 RDXP35241 583 aaKnown RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 BRCC3P46736 316 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 PXNP49023 591 aaPredicted RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 UBE2HP62256 183 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 GRIN1Q05586 938 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 GRSF1Q12849 480 aaKnown RBP eCLIP11.12□□□□□ -0.63
SDF2-209ENST00000591903 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 MAPK6Q16659 721 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 FOXD4L6Q3SYB3 417 aaPredicted RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 CTXN3Q4LDR2 81 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 FOXD4L3Q6VB84 417 aaPredicted RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 ELOA2Q8IYF1 753 aaPredicted RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 IQUBQ8NA54 791 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 SHKBP1Q8TBC3 707 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 CLIC6Q96NY7 704 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 TMEM209Q96SK2 561 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 SLC32A1Q9H598 525 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 SLC38A7Q9NVC3 462 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 GTSE1Q9NYZ3 720 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 FBXL5Q9UKA1 691 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 DNM3Q9UQ16 869 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 SETXQ7Z333 2677 aaKnown RBP11.12□□□□□ -0.63
SDF2-209ENST00000591903 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
SDF2-209ENST00000591903 MYO16Q9Y6X6 1858 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 I3L4J1 428 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 FGF19O95750 216 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 TOP3BO95985 862 aaKnown RBP11.11□□□□□ -0.63
SDF2-209ENST00000591903 SCP2P22307 547 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 WEE1P30291 646 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 RARRES1P49788 294 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 AMPD2Q01433 879 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 GLRA4Q5JXX5 417 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 ZNF280DQ6N043 979 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 CNNM4Q6P4Q7 775 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 ARID3BQ8IVW6 561 aaPredicted RBP11.11□□□□□ -0.63
SDF2-209ENST00000591903 MCPH1Q8NEM0 835 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 RSPRY1Q96DX4 576 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 CXCL16Q9H2A7 254 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 TNMDQ9H2S6 317 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 C17orf75Q9HAS0 396 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 TOPORSQ9NS56 1045 aaPredicted RBP11.11□□□□□ -0.63
SDF2-209ENST00000591903 DDX19AQ9NUU7 478 aaKnown RBP11.11□□□□□ -0.63
SDF2-209ENST00000591903 THG1LQ9NWX6 298 aaKnown RBP11.11□□□□□ -0.63
SDF2-209ENST00000591903 ANKFY1Q9P2R3 1169 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 KCNG1Q9UIX4 513 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 KIAA1024Q9UPX6 916 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 LOC400499M0QZD8 3231 aa11.11□□□□□ -0.63
SDF2-209ENST00000591903 DENND4CQ5VZ89 1909 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms