RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 NDFIP2Q9NV92 336 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 DDX43Q9NXZ2 648 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 PKP3Q9Y446 797 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 PASKQ96RG2 1323 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 GFPT2O94808 682 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 SP100P23497 879 aaPredicted RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 DEKP35659 375 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 PTGER2P43116 358 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 PPP3CCP48454 512 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TMEM164Q5U3C3 297 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 HEATR6Q6AI08 1181 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 GRAMD4Q6IC98 578 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 MTERF4Q7Z6M4 381 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ARHGAP9Q9BRR9 750 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ABCF3Q9NUQ8 709 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TRMT1Q9NXH9 659 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 SNTG2Q9NY99 539 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ASB3Q9Y575 518 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 KLRG2A4D1S0 409 aaPredicted RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 H3BM21 787 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 HDCP19113 662 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 RPIAP49247 311 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TUSC3Q13454 348 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ADCK5Q3MIX3 580 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 TMCO4Q5TGY1 634 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 PRPF39Q86UA1 669 aaKnown RBP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.02□□□□□ -0.49
SEH1L-208ENST00000590843 CEP120Q8N960 986 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 GAD1Q99259 594 aa12.02□□□□□ -0.49
SEH1L-208ENST00000590843 LRRC72A6NJI9 287 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 INPP4BO15327 924 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 RRM1P23921 792 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 WEE1P30291 646 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 FYB2Q5VWT5 728 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 SERPINB11Q96P15 392 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 NELL2Q99435 816 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 GPR63Q9BZJ6 419 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 PARVAQ9NVD7 372 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 SUSD2Q9UGT4 822 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 NDRG2Q9UN36 371 aaKnown RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 MRC1P22897 1456 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 BUB1O43683 1085 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 PLCL1Q15111 1095 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 KLHL35Q6PF15 583 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 HASPINQ8TF76 798 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 CARD6Q9BX69 1037 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 ALDH8A1Q9H2A2 487 aaPredicted RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 FANCEQ9HB96 536 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 TMEM161AQ9NX61 479 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 ZNF521Q96K83 1311 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 MAPTP10636 758 aaKnown RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 VDRP11473 427 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 TAC1P20366 129 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 ATP2C1P98194 919 aaPredicted RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 GOLGA7BQ2TAP0 167 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 E4F1Q66K89 784 aaPredicted RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 MIB1Q86YT6 1006 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 WDR49Q8IV35 697 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 KRT35Q92764 455 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 TMEM8AQ9HCN3 771 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
SEH1L-208ENST00000590843 SULT2A1Q06520 285 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 TGM3Q08188 693 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 EFEMP1Q12805 493 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 MTFR1Q15390 333 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 DEC1Q9P2X7 70 aa12.01□□□□□ -0.49
SEH1L-208ENST00000590843 GOLGA8MH3BSY2 632 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 IGSF6O95976 241 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 GTF2H1P32780 548 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 PHACTR4Q8IZ21 702 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 CHPFQ8IZ52 775 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 PDCL2Q8N4E4 241 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 MFSD14AQ96MC6 490 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 FAM129AQ9BZQ8 928 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 INTS2Q9H0H0 1204 aaKnown RBP12□□□□□ -0.49
SEH1L-208ENST00000590843 DDX41Q9UJV9 622 aaKnown RBP12□□□□□ -0.49
SEH1L-208ENST00000590843 BAG5Q9UL15 447 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 BRPF3Q9ULD4 1205 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 ZWINTO95229 277 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 WDR45BQ5MNZ6 344 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 C8orf74Q6P047 294 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 ADCK2Q7Z695 626 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 RASEFQ8IZ41 740 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 B3GALNT2Q8NCR0 500 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 ULK4Q96C45 1275 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 CPB2Q96IY4 423 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 COG5Q9UP83 839 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 LRP6O75581 1613 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 TMEM265A0A087WTH1 108 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 SMPD1P17405 629 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 SCNN1GP51170 649 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 NRLP54845 237 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 ERVK-21P61565 698 aa12□□□□□ -0.49
SEH1L-208ENST00000590843 YWHAGP61981 247 aaKnown RBP eCLIP12□□□□□ -0.49
SEH1L-208ENST00000590843 SPIRE2Q8WWL2 714 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms