RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 BACE2Q9Y5Z0 518 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 SZT2Q5T011 3432 aa12.91□□□□□ -0.34
APOC1-206ENST00000590334 FSD2A1L4K1 749 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 H7C4K7 107 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 NOL4O94818 638 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 URODP06132 367 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 TPM3P06753 285 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 POU3F3P20264 500 aaPredicted RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 LHX1P48742 406 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 KLK7P49862 253 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 CDH8P55286 799 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 CREMQ03060 361 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 SMC1AQ14683 1233 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 PTPN14Q15678 1187 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 ZNF697Q5TEC3 545 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 OVOS1Q6IE37 1185 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 TMC7Q7Z402 723 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 PPM1KQ8N3J5 372 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 MRPL43Q8N983 215 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 MRPL38Q96DV4 380 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 B3GALT6Q96L58 329 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 KREMEN1Q96MU8 473 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 ARID3AQ99856 593 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 TCF25Q9BQ70 676 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 RTP3Q9BQQ7 232 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 GANQ9H2C0 597 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 RXFP1Q9HBX9 757 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.9□□□□□ -0.349e-7■■□□□ 11.5
APOC1-206ENST00000590334 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 LMCD1Q9NZU5 365 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 FNIP2Q9P278 1114 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 CNTN6Q9UQ52 1028 aa12.9□□□□□ -0.34
APOC1-206ENST00000590334 TIMM13Q9Y5L4 95 aaPredicted RBP12.9□□□□□ -0.34
APOC1-206ENST00000590334 CXCL14O95715 111 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 WEE2P0C1S8 567 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 UCHL3P15374 230 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
APOC1-206ENST00000590334 RAP1GAPP47736 663 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 MFAP3P55082 362 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
APOC1-206ENST00000590334 APBA1Q02410 837 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 LRMPQ12912 555 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 BMS1Q14692 1282 aaKnown RBP12.89□□□□□ -0.35
APOC1-206ENST00000590334 PSMD5Q16401 504 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 FIGNQ5HY92 759 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 KIAA1841Q6NSI8 718 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 SCARA5Q6ZMJ2 495 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 RRAGAQ7L523 313 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 UNC93AQ86WB7 457 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 OSTM1Q86WC4 334 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 THEM5Q8N1Q8 247 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 RIN2Q8WYP3 895 aaPredicted RBP12.89□□□□□ -0.35
APOC1-206ENST00000590334 ACBD6Q9BR61 282 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 UBE2TQ9NPD8 197 aaPredicted RBP12.89□□□□□ -0.35
APOC1-206ENST00000590334 ENTPD7Q9NQZ7 604 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
APOC1-206ENST00000590334 ITIH6Q6UXX5 1313 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 PATJQ8NI35 1801 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 C2orf71A6NGG8 1288 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 OR6C75A6NL08 312 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 RFXAPO00287 272 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 EPHB6O15197 1021 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 CILPO75339 1184 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 CLSTN1O94985 981 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 C1RP00736 705 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 LMO2P25791 158 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 IRS1P35568 1242 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 GNL1P36915 607 aaPredicted RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 GRIN2CQ14957 1233 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 PTPROQ16827 1216 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 IQCEQ6IPM2 695 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 ZNF280DQ6N043 979 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 PRSS55Q6UWB4 352 aaPredicted RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 RSPO2Q6UXX9 243 aaPredicted RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 NEK11Q8NG66 645 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 KAT5Q92993 513 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 CLSTN3Q9BQT9 956 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 SNX25Q9H3E2 840 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 PRDM12Q9H4Q4 367 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 FAM207AQ9NSI2 230 aaPredicted RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 DNAJC12Q9UKB3 198 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 AJAP1Q9UKB5 411 aaPredicted RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
APOC1-206ENST00000590334 FHOD1Q9Y613 1164 aa12.88□□□□□ -0.35
APOC1-206ENST00000590334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.87□□□□□ -0.35
APOC1-206ENST00000590334 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 C2CD2LO14523 706 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
APOC1-206ENST00000590334 PCSK1P29120 753 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms