RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CTXN3Q4LDR2 81 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 KIAA0319Q5VV43 1072 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 ZNF280DQ6N043 979 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 PHLDB3Q6NSJ2 640 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 GPR153Q6NV75 609 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 RRAGAQ7L523 313 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 LIMS2Q7Z4I7 341 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 ARHGEF19Q8IW93 802 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 GPR65Q8IYL9 337 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 TTC39CQ8N584 583 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 OR6B3Q8NGW1 331 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 OXCT2Q9BYC2 517 aaPredicted RBP14.57□□□□□ -0.08
VMP1-210ENST00000589823 DNAI2Q9GZS0 605 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 PRDM12Q9H4Q4 367 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 FAM124BQ9H5Z6 455 aaPredicted RBP14.57□□□□□ -0.08
VMP1-210ENST00000589823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.57□□□□□ -0.08
VMP1-210ENST00000589823 FAM207AQ9NSI2 230 aaPredicted RBP14.57□□□□□ -0.08
VMP1-210ENST00000589823 SIK3Q9Y2K2 1263 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 PLXNA4Q9HCM2 1894 aa14.57□□□□□ -0.08
VMP1-210ENST00000589823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 A8MXQ7 604 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 FSCN2O14926 492 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 OAZ2O95190 189 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 CD58P19256 250 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 TRIM21P19474 475 aaKnown RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 PCSK1P29120 753 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 GNL1P36915 607 aaPredicted RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 KLK7P49862 253 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 MRPL58Q14197 206 aaKnown RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 PTPN14Q15678 1187 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 KLHDC7AQ5VTJ3 777 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 GJB7Q6PEY0 223 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 PRSS55Q6UWB4 352 aaPredicted RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 LNX1Q8TBB1 728 aaPredicted RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 KBTBD7Q8WVZ9 684 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 AUTS2Q8WXX7 1259 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 JAKMIP2Q96AA8 810 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 MRPL38Q96DV4 380 aaKnown RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 MRPL45Q9BRJ2 306 aaKnown RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 EMILIN2Q9BXX0 1053 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 SDCBP2Q9H190 292 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 SIX2Q9NPC8 291 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 CISHQ9NSE2 258 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 DDX43Q9NXZ2 648 aaKnown RBP14.56□□□□□ -0.08
VMP1-210ENST00000589823 MTRRQ9UBK8 725 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 DAAM1Q9Y4D1 1078 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 BACE2Q9Y5Z0 518 aa14.56□□□□□ -0.08
VMP1-210ENST00000589823 OR6C75A6NL08 312 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 GABRDO14764 452 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 UCHL3P15374 230 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 IRS1P35568 1242 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 APBA1Q02410 837 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 RAPGEF1Q13905 1077 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 CAMK1Q14012 370 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 GRIN2CQ14957 1233 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 ARHGAP44Q17R89 818 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 UNC93AQ86WB7 457 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 OSTM1Q86WC4 334 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 MRPL43Q8N983 215 aaKnown RBP14.55□□□□□ -0.08
VMP1-210ENST00000589823 KAT5Q92993 513 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 PPP2R3CQ969Q6 453 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 FAM161BQ96MY7 647 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 ARID3AQ99856 593 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 ACBD6Q9BR61 282 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 GANQ9H2C0 597 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 FNIP2Q9P278 1114 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 DNAJC12Q9UKB3 198 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 BARX2Q9UMQ3 279 aaPredicted RBP14.55□□□□□ -0.08
VMP1-210ENST00000589823 IRAK3Q9Y616 596 aa14.55□□□□□ -0.08
VMP1-210ENST00000589823 C2orf71A6NGG8 1288 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 LILRB3O75022 631 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 PDGFRBP09619 1106 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 NDST1P52848 882 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 POLR2FP61218 127 aaKnown RBP14.54□□□□□ -0.08
VMP1-210ENST00000589823 TSPY1Q01534 308 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 INCA1Q0VD86 236 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 PTPN21Q16825 1174 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 IQCEQ6IPM2 695 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 DPY19L2P1Q6NXN4 242 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 CACNA2D4Q7Z3S7 1137 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 TNIP3Q96KP6 325 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 KREMEN1Q96MU8 473 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 GAS2L1Q99501 681 aaPredicted RBP14.54□□□□□ -0.08
VMP1-210ENST00000589823 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 RXFP1Q9HBX9 757 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 LMCD1Q9NZU5 365 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 FBXL5Q9UKA1 691 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 CDH9Q9ULB4 789 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 STXBP5LQ9Y2K9 1186 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 PCDHB4Q9Y5E5 795 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 FHOD1Q9Y613 1164 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 CDY1Q9Y6F8 540 aa14.54□□□□□ -0.08
VMP1-210ENST00000589823 COL4A4P53420 1690 aaPredicted RBP14.54□□□□□ -0.08
VMP1-210ENST00000589823 CHD9Q3L8U1 2897 aa14.53□□□□□ -0.08
VMP1-210ENST00000589823 HIDE1A8MVS5 230 aa14.53□□□□□ -0.08
VMP1-210ENST00000589823 AP5Z1O43299 807 aa14.53□□□□□ -0.08
VMP1-210ENST00000589823 CILPO75339 1184 aa14.53□□□□□ -0.08
VMP1-210ENST00000589823 NOL4O94818 638 aa14.53□□□□□ -0.08
VMP1-210ENST00000589823 ADH1AP07327 375 aa14.53□□□□□ -0.08
VMP1-210ENST00000589823 CNPP09543 421 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms