RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
VAT1-206ENST00000589709 THEM5Q8N1Q8 247 aa13.2□□□□□ -0.3
VAT1-206ENST00000589709 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
VAT1-206ENST00000589709 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
VAT1-206ENST00000589709 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
VAT1-206ENST00000589709 ZNF334Q9HCZ1 680 aaPredicted RBP13.2□□□□□ -0.3
VAT1-206ENST00000589709 SPATA6Q9NWH7 488 aaPredicted RBP13.2□□□□□ -0.3
VAT1-206ENST00000589709 EP300Q09472 2414 aaPredicted RBP13.2□□□□□ -0.3
VAT1-206ENST00000589709 MYO15AQ9UKN7 3530 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 WDR87Q6ZQQ6 2873 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 A0A087X0B3 334 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 A0A1W2PRU2 124 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 GCNT3O95395 438 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 IDEP14735 1019 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 WEE1P30291 646 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 GDI1P31150 447 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 PNPLA4P41247 253 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 SV2CQ496J9 727 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
VAT1-206ENST00000589709 ZNF560Q96MR9 790 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 PYM1Q9BRP8 204 aaKnown RBP13.19□□□□□ -0.3
VAT1-206ENST00000589709 FAM213AQ9BRX8 229 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 TBC1D7Q9P0N9 293 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 R4GN57 208 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 ZNF292O60281 2723 aa13.19□□□□□ -0.3
VAT1-206ENST00000589709 SPTBN4Q9H254 2564 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 HEPACAM2A8MVW5 462 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 ARNTLO00327 626 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 ZNF263O14978 683 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
VAT1-206ENST00000589709 EXTL3O43909 919 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 PPP6R2O75170 966 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 PDIA4P13667 645 aaKnown RBP13.18□□□□□ -0.3
VAT1-206ENST00000589709 CASP5P51878 434 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 STK38Q15208 465 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 SLC39A12Q504Y0 691 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 WSCD1Q658N2 575 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 C1orf228Q6PIY5 440 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 GAREM2Q75VX8 874 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 LRRTM3Q86VH5 581 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 ARID3BQ8IVW6 561 aaPredicted RBP13.18□□□□□ -0.3
VAT1-206ENST00000589709 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 DCP1BQ8IZD4 617 aaKnown RBP13.18□□□□□ -0.3
VAT1-206ENST00000589709 SYCP3Q8IZU3 236 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 TTC9BQ8N6N2 239 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 SPPL2BQ8TCT7 592 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 NELL1Q92832 810 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 SNX21Q969T3 373 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 ZNF396Q96N95 335 aaPredicted RBP13.18□□□□□ -0.3
VAT1-206ENST00000589709 IER2Q9BTL4 223 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 MKNK1Q9BUB5 465 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 CUEDC2Q9H467 287 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 SLITRK6Q9H5Y7 841 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 ZMYM5Q9UJ78 669 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 SCN1AP35498 2009 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 DMDP11532 3685 aa13.18□□□□□ -0.3
VAT1-206ENST00000589709 ANK1P16157 1881 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 SPTLC2O15270 562 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 CHADO15335 359 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 HAPLN1P10915 354 aaPredicted RBP13.17□□□□□ -0.3
VAT1-206ENST00000589709 GABRR2P28476 465 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 WNT7BP56706 349 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
VAT1-206ENST00000589709 E2F4Q16254 413 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 ARHGAP15Q53QZ3 475 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 PDILTQ8N807 584 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 RSPRY1Q96DX4 576 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 SAAL1Q96ER3 474 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 MSANTD3Q96H12 275 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 CBWD1Q9BRT8 395 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 ATXN3LQ9H3M9 355 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 TASP1Q9H6P5 420 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 IL21Q9HBE4 155 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 RBAKQ9NYW8 714 aaPredicted RBP13.17□□□□□ -0.3
VAT1-206ENST00000589709 PCDHGA2Q9Y5H1 932 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 COL4A3Q01955 1670 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 MIA3Q5JRA6 1907 aa13.17□□□□□ -0.3
VAT1-206ENST00000589709 SOBPA7XYQ1 873 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 SOAT2O75908 522 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 PRPF6O94906 941 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms