RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 ARID3BQ8IVW6 561 aaPredicted RBP23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 KRI1Q8N9T8 703 aaKnown RBP23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 IRF7Q92985 503 aa23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 PSMG2Q969U7 264 aa23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 PANK2Q9BZ23 570 aa23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 IL21Q9HBE4 155 aa23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 PRMT8Q9NR22 394 aaPredicted RBP23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 C2CD2Q9Y426 696 aa23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 PIAS3Q9Y6X2 628 aa23.09■■□□□ 1.29
NEDD4L-225ENST00000589054 CYB561D2O14569 222 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 HOXC13P31276 330 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 DEPDC1BQ8WUY9 529 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 FAM3CQ92520 227 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 SLITRK6Q9H5Y7 841 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 LMAN1LQ9HAT1 526 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 TMLHEQ9NVH6 421 aa23.08■■□□□ 1.29
NEDD4L-225ENST00000589054 ANK1P16157 1881 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 ZNF263O14978 683 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 LILRB5O75023 590 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 CCNE1P24864 410 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 MAGEA9P43362 315 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 ALDH1A3P47895 512 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 SLFN12LQ6IEE8 588 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 ARMCX5Q6P1M9 558 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 TTC8Q8TAM2 541 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 CXorf38Q8TB03 319 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 ZFYVE19Q96K21 471 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 USP28Q96RU2 1077 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 PYM1Q9BRP8 204 aaKnown RBP23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 CHRDQ9H2X0 955 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 MTMR6Q9Y217 621 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 TSC2P49815 1807 aa23.07■■□□□ 1.28
NEDD4L-225ENST00000589054 MAN2B1O00754 1011 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 KINO60870 393 aaKnown RBP23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 PRAMEF12O95522 483 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 CHRNB1P11230 501 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 GABRR2P28476 465 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 CYP4F8P98187 520 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 FCHO2Q0JRZ9 810 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 PLD1Q13393 1074 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 RRAGBQ5VZM2 374 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 TXNDC11Q6PKC3 985 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 STKLD1Q8NE28 680 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 GIPC2Q8TF65 315 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 POMGNT1Q8WZA1 660 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 RUBCNQ92622 972 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 SAAL1Q96ER3 474 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 ATXN3LQ9H3M9 355 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 FOXD4L1Q9NU39 408 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 C2orf42Q9NWW7 574 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 ZSCAN32Q9NX65 697 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 STK17AQ9UEE5 414 aa23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 MRPS17Q9Y2R5 130 aaKnown RBP23.06■■□□□ 1.28
NEDD4L-225ENST00000589054 CACNA1AO00555 2505 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 NCAM2O15394 837 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 TAF6P49848 677 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 L1TD1Q5T7N2 865 aaKnown RBP23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 GPR158Q5T848 1215 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 TMEM150AQ86TG1 271 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 GLIS3Q8NEA6 775 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 SEPT5Q99719 369 aaPredicted RBP23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 FAM213AQ9BRX8 229 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 GPR88Q9GZN0 384 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 SMG9Q9H0W8 520 aaKnown RBP23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 MRPL44Q9H9J2 332 aaKnown RBP23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 RBM12Q9NTZ6 932 aaKnown RBP23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 ASB3Q9Y575 518 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 PCDHGA2Q9Y5H1 932 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 CEP250Q9BV73 2442 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 TICRRQ7Z2Z1 1910 aa23.05■■□□□ 1.28
NEDD4L-225ENST00000589054 GOLGA8IPA6NC78 632 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 GOLGA8JA6NMD2 632 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 SLC38A8A6NNN8 435 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 GPR15P49685 360 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 CCDC142Q17RM4 750 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 MGAT5BQ3V5L5 792 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 SV2BQ7L1I2 683 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 CBWD1Q9BRT8 395 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 SLC46A2Q9BY10 475 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 GTSE1Q9NYZ3 720 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 HSFX1Q9UBD0 423 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 CCDC39Q9UFE4 941 aa23.04■■□□□ 1.28
NEDD4L-225ENST00000589054 FRMD3A2A2Y4 597 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 KPNA7A9QM74 516 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 CHADO15335 359 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 HCRTO43612 131 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 HAPLN1P10915 354 aaPredicted RBP23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 PAX3P23760 479 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 SATB1Q01826 763 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 POU5F1Q01860 360 aaKnown RBP23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 TNK2Q07912 1038 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 DMWDQ09019 674 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 MAMSTRQ6ZN01 415 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 C1orf127Q8N9H9 656 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 ATRIPQ8WXE1 791 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 HVCN1Q96D96 273 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 HINFPQ9BQA5 517 aa23.03■■□□□ 1.28
NEDD4L-225ENST00000589054 GCNT3O95395 438 aa23.02■■□□□ 1.28
NEDD4L-225ENST00000589054 HMGA1P17096 107 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms