RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 MICAL3Q7RTP6 2002 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 LRRIQ4A6NIV6 560 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 ENPP3O14638 875 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 FAM107AO95990 144 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 AMHP03971 560 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 TNFAIP3P21580 790 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 FLT3P36888 993 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 LIG3P49916 1009 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 MAPK7Q13164 816 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 TCEAL1Q15170 157 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 CDCA2Q69YH5 1023 aaPredicted RBP15.59■□□□□ 0.09
CCDC43-203ENST00000588210 YTHDF3Q7Z739 585 aaKnown RBP15.59■□□□□ 0.09
CCDC43-203ENST00000588210 OR2W6PQ8NHA6 318 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 UBLCP1Q8WVY7 318 aaPredicted RBP15.59■□□□□ 0.09
CCDC43-203ENST00000588210 BSNDQ8WZ55 320 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 ARHGEF26Q96DR7 871 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 C2orf40Q9H1Z8 148 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 TSPYL2Q9H2G4 693 aaPredicted RBP15.59■□□□□ 0.09
CCDC43-203ENST00000588210 MINDY3Q9H8M7 445 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 CHST12Q9NRB3 414 aa15.59■□□□□ 0.09
CCDC43-203ENST00000588210 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.58■□□□□ 0.09
CCDC43-203ENST00000588210 MEFVO15553 781 aaPredicted RBP15.58■□□□□ 0.09
CCDC43-203ENST00000588210 ATP2A2P16615 1042 aaKnown RBP15.58■□□□□ 0.09
CCDC43-203ENST00000588210 ABCB4P21439 1286 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 FGFR4P22455 802 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 HABP4Q5JVS0 413 aaKnown RBP15.58■□□□□ 0.09
CCDC43-203ENST00000588210 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.58■□□□□ 0.097e-6■□□□□ 10.9
CCDC43-203ENST00000588210 CATSPER4Q7RTX7 472 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 ZBTB8OSQ8IWT0 167 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 RHOT2Q8IXI1 618 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 C3orf20Q8ND61 904 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 LMO3Q8TAP4 145 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 TMEM174Q8WUU8 243 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 CCT8L2Q96SF2 557 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 TXLNGYQ9BZA5 131 aa15.58■□□□□ 0.09
CCDC43-203ENST00000588210 LAMA3Q16787 3333 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 GOLGA6L10A0A0M3HER8 536 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 INO80B-WBP1J3KQ70 363 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 PPFIA2O75334 1257 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 KIAA0754O94854 1291 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 HPDP32754 393 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-203ENST00000588210 PEX3P56589 373 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 DEFB103AP81534 67 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 DMP1Q13316 513 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-203ENST00000588210 C11orf63Q6NUN7 778 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 RTN4RL1Q86UN2 441 aaPredicted RBP15.58■□□□□ 0.08
CCDC43-203ENST00000588210 DEPTORQ8TB45 409 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 RGS18Q9NS28 235 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 C1orf112Q9NSG2 853 aa15.58■□□□□ 0.08
CCDC43-203ENST00000588210 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.58■□□□□ 0.08
CCDC43-203ENST00000588210 LARSQ9P2J5 1176 aaKnown RBP15.58■□□□□ 0.08
CCDC43-203ENST00000588210 DENND3A2RUS2 1198 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 FAM187AA6NFU0 413 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 EXOC3O60645 756 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 PAEPP09466 180 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 PLS3P13797 630 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 EFNA5P52803 228 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 MBTD1Q05BQ5 628 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 PHLDB3Q6NSJ2 640 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 TOP1MTQ969P6 601 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 AGPAT1Q99943 283 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 ADAM2Q99965 735 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 NTPCRQ9BSD7 190 aaKnown RBP15.57■□□□□ 0.08
CCDC43-203ENST00000588210 TRIM51Q9BSJ1 452 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 THAP2Q9H0W7 228 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 CENPHQ9H3R5 247 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 COG5Q9UP83 839 aa15.57■□□□□ 0.08
CCDC43-203ENST00000588210 P4HA2O15460 535 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 MGEA5O60502 916 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 MAPTP10636 758 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 NPTX2P47972 431 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 SEC24CP53992 1094 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 PPP2R2AP63151 447 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 SMAD3P84022 425 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 DR1Q01658 176 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 DHX9Q08211 1270 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 ALCAMQ13740 583 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 DHX34Q14147 1143 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 DSC3Q14574 896 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 ARHGAP44Q17R89 818 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 SLC24A5Q71RS6 500 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 PALB2Q86YC2 1186 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 C12orf56Q8IXR9 622 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 SPIRE2Q8WWL2 714 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 FMO2Q99518 471 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 DPH5Q9H2P9 285 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 PRMT7Q9NVM4 692 aaPredicted RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 TAS2R14Q9NYV8 317 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 NR2E1Q9Y466 385 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 CCDC169A6NNP5 214 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 MIF4GDA9UHW6 222 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 FSBPO95073 299 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 KRT13P13646 458 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 AXLP30530 894 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 SMTNP53814 917 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 EIF3BP55884 814 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 DUPD1Q68J44 220 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 INTS8Q75QN2 995 aaKnown RBP15.56■□□□□ 0.08
CCDC43-203ENST00000588210 HERC6Q8IVU3 1022 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms