RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GNA15P30679 374 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 BRCC3P46736 316 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 OR1G1P47890 313 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 PDE6CP51160 858 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 NDST1P52848 882 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 RAD23BP54727 409 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 FMO1Q01740 532 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 TIGD5Q53EQ6 642 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 FAM117BQ6P1L5 589 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 DCLRE1AQ6PJP8 1040 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 ZNF365Q70YC5 407 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 PALB2Q86YC2 1186 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 GLYCTKQ8IVS8 523 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 TOP6BLQ8N6T0 577 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 SLC4A11Q8NBS3 891 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 SLC30A5Q8TAD4 765 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 FAM193BQ96PV7 902 aaPredicted RBP12.07□□□□□ -0.48
VMP1-207ENST00000588131 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 ZSWIM1Q9BR11 485 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.07□□□□□ -0.48
VMP1-207ENST00000588131 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
VMP1-207ENST00000588131 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
VMP1-207ENST00000588131 ADAMTS1Q9UHI8 967 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 BARX2Q9UMQ3 279 aaPredicted RBP12.07□□□□□ -0.48
VMP1-207ENST00000588131 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 PPP2R2CQ9Y2T4 447 aa12.07□□□□□ -0.48
VMP1-207ENST00000588131 FAM170AA1A519 330 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 HUS1O60921 280 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 TACC1O75410 805 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 B3GAT3O94766 335 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 FGBP02675 491 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 CFHP08603 1231 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 TNFAIP3P21580 790 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 BRD2P25440 801 aaKnown RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 SLC11A1P49279 550 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 CDR2Q01850 454 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 SLC18A3Q16572 532 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 TMEM240Q5SV17 173 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 WSCD1Q658N2 575 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 DSTYKQ6XUX3 929 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 DNAAF5Q86Y56 855 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 ADGRF2Q8IZF7 708 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 CCAR2Q8N163 923 aaKnown RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 LRRC43Q8N309 656 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 PDCL2Q8N4E4 241 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 APPL2Q8NEU8 664 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 TFAP2BQ92481 460 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 DPF3Q92784 378 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 ZNF689Q96CS4 500 aaPredicted RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 TMEM176AQ96HP8 235 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 RC3H2Q9HBD1 1191 aaKnown RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 TFR2Q9UP52 801 aa12.06□□□□□ -0.48
VMP1-207ENST00000588131 PRG3Q9Y2Y8 225 aaPredicted RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
VMP1-207ENST00000588131 ZBBXA8MT70 800 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 ESPNB1AK53 854 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 TMEM189-UBE2V1I3L0A0 370 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 NRP1O14786 923 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 THAP12O43422 761 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 PAEPP09466 180 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 CCDC175P0C221 793 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 LMO2P25791 158 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 MSNP26038 577 aaKnown RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 ANXA13P27216 316 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 PBX3P40426 434 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 BPIFB4P59827 614 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 BMS1Q14692 1282 aaKnown RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 SMYD5Q6GMV2 418 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 DPH6Q7L8W6 267 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 REXO1L1PQ8IX06 675 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 TTC39CQ8N584 583 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 OR6B3Q8NGW1 331 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 TMEM175Q9BSA9 504 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 NT5C1AQ9BXI3 368 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 DPEP3Q9H4B8 488 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 CWH43Q9H720 699 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 KCND1Q9NSA2 647 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 SEPT11Q9NVA2 429 aaKnown RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 TAS2R14Q9NYV8 317 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
VMP1-207ENST00000588131 NAGPAQ9UK23 515 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 PCDHA13Q9Y5I0 950 aa12.05□□□□□ -0.48
VMP1-207ENST00000588131 RCCD1A6NED2 376 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 A8MXQ7 604 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 M0QZQ0 153 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 GABRDO14764 452 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 GALTP07902 379 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 ODC1P11926 461 aa12.04□□□□□ -0.48
VMP1-207ENST00000588131 CD19P15391 556 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms