RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TMEM270Q6UE05 265 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 POLNQ7Z5Q5 900 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 VSIG1Q86XK7 387 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 NIPA2Q8N8Q9 360 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 TTC13Q8NBP0 860 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 NSUN6Q8TEA1 469 aaKnown RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 ALKBH8Q96BT7 664 aaKnown RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 RMDN2Q96LZ7 410 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 JPH1Q9HDC5 661 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 MLXIPLQ9NP71 852 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 RBAKQ9NYW8 714 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 SEPT9Q9UHD8 586 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 ZNFX1Q9P2E3 1918 aaKnown RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 ZNF862O60290 1169 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 NR3C2P08235 984 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 ATP2A2P16615 1042 aaKnown RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 KRT15P19012 456 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 CD58P19256 250 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 FOXN2P32314 431 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 NAMPTP43490 491 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 TBC1D10BQ4KMP7 808 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-206ENST00000587730 FYB2Q5VWT5 728 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 TAS1R3Q7RTX0 852 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 TUBB6Q9BUF5 446 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 ETNK1Q9HBU6 452 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 XPNPEP1Q9NQW7 623 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 PHTF1Q9UMS5 762 aa19.62■□□□□ 0.73
DDX39A-206ENST00000587730 LIN7AO14910 233 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-206ENST00000587730 EDF1O60869 148 aaKnown RBP19.61■□□□□ 0.73
DDX39A-206ENST00000587730 KCNA2P16389 499 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 ZNF132P52740 706 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 PRKCEQ02156 737 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 MOGSQ13724 837 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 TNFAIP1Q13829 316 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 GNPTABQ3T906 1256 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 TFDP3Q5H9I0 405 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 SPOCD1Q6ZMY3 1216 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 TMEM35BQ8NCS4 154 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 ZBED3Q96IU2 234 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-206ENST00000587730 SLC9A2Q9UBY0 812 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 USTQ9Y2C2 406 aa19.61■□□□□ 0.73
DDX39A-206ENST00000587730 VNN1O95497 513 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 CHRNA5P30532 468 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 NOP14P78316 857 aaKnown RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 SF3A3Q12874 501 aaKnown RBP eCLIP19.6■□□□□ 0.738e-9■■■■■ 27.7
DDX39A-206ENST00000587730 GPS1Q13098 491 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 KLHL38Q2WGJ6 581 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 ZFYVE27Q5T4F4 411 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 RNASEH2BQ5TBB1 312 aaKnown RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 HHATQ5VTY9 493 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 SWSAP1Q6NVH7 229 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 DNAJC24Q6P3W2 148 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 PNMA3Q9UL41 463 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 DNPEPQ9ULA0 475 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 CEP83Q9Y592 693 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 PECAM1P16284 738 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 GEMIN4P57678 1058 aaKnown RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 EMC2Q15006 297 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 OASLQ15646 514 aaKnown RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 EFHC2Q5JST6 749 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 ATP11CQ8NB49 1132 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 DEPTORQ8TB45 409 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 PAIP2Q9BPZ3 127 aaKnown RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 TMEM134Q9H6X4 195 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 VPS37BQ9H9H4 285 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 SAR1AQ9NR31 198 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 RNF146Q9NTX7 359 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-206ENST00000587730 GGT7Q9UJ14 662 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 STRIP2Q9ULQ0 834 aa19.6■□□□□ 0.73
DDX39A-206ENST00000587730 hCG_1818297A0A087WSY0 165 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 TRAFD1O14545 582 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-206ENST00000587730 LMNAP02545 664 aaKnown RBP19.59■□□□□ 0.73
DDX39A-206ENST00000587730 CA4P22748 312 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 GCAP28676 217 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 MGAT5Q09328 741 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 SLC45A4Q5BKX6 768 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 PWWP2AQ96N64 755 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 MSTO1Q9BUK6 570 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 PORCNQ9H237 461 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 STK38LQ9Y2H1 464 aa19.59■□□□□ 0.73
DDX39A-206ENST00000587730 A0A0B4J269 797 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 K7ERI5 159 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 VWA5AO00534 786 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 TM9SF1O15321 606 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 RAD17O75943 681 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 TROVE2P10155 538 aaKnown RBP eCLIP19.58■□□□□ 0.73
DDX39A-206ENST00000587730 ATF7P17544 494 aaPredicted RBP19.58■□□□□ 0.73
DDX39A-206ENST00000587730 ARL4CP56559 192 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 NLRP11P59045 1033 aaKnown RBP19.58■□□□□ 0.73
DDX39A-206ENST00000587730 MKRN4PQ13434 485 aaPredicted RBP19.58■□□□□ 0.73
DDX39A-206ENST00000587730 NCOA4Q13772 614 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 BAATQ14032 418 aaPredicted RBP19.58■□□□□ 0.73
DDX39A-206ENST00000587730 SURF1Q15526 300 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 HIF1AQ16665 826 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 ACCSLQ4AC99 568 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 DCUN1D2Q6PH85 259 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 ABHD15Q6UXT9 468 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 TRMT1LQ7Z2T5 733 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms