RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
ATG4D-207ENST00000587256 MYADMQ96S97 322 aa15.93■□□□□ 0.14
ATG4D-207ENST00000587256 DMAC2Q9NW81 257 aa15.93■□□□□ 0.14
ATG4D-207ENST00000587256 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.93■□□□□ 0.14
ATG4D-207ENST00000587256 SORCS3Q9UPU3 1222 aa15.93■□□□□ 0.14
ATG4D-207ENST00000587256 PCDHA5Q9Y5H7 936 aa15.93■□□□□ 0.14
ATG4D-207ENST00000587256 LRRIQ3A6PVS8 624 aaPredicted RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 RPL13P26373 211 aaKnown RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 MYL7Q01449 175 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 DUSP4Q13115 394 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 ZNF658Q5TYW1 1059 aaPredicted RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 IQCEQ6IPM2 695 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 TMEM174Q8WUU8 243 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 SEPT5Q99719 369 aaPredicted RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 RTP3Q9BQQ7 232 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 CORO1BQ9BR76 489 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 ZCWPW1Q9H0M4 648 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 GZF1Q9H116 711 aaPredicted RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 GDAP2Q9NXN4 497 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 EPS15L1Q9UBC2 864 aa15.92■□□□□ 0.14
ATG4D-207ENST00000587256 DNMT3BQ9UBC3 853 aaKnown RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 MRPS23Q9Y3D9 190 aaKnown RBP15.92■□□□□ 0.14
ATG4D-207ENST00000587256 VNN2O95498 520 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 RHOP08100 348 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 PTPN2P17706 415 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 ALDH1A3P47895 512 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 CDR1P51861 262 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 AP3M2P53677 418 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 UBE2HP62256 183 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 TNNC1P63316 161 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 ZXDAP98168 799 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 CENPPQ6IPU0 288 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 DCP1BQ8IZD4 617 aaKnown RBP15.91■□□□□ 0.14
ATG4D-207ENST00000587256 ATAD1Q8NBU5 361 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 PLEKHO2Q8TD55 490 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 PARD3BQ8TEW8 1205 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 ING5Q8WYH8 240 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 EDAQ92838 391 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 ZNF512Q96ME7 567 aaPredicted RBP15.91■□□□□ 0.14
ATG4D-207ENST00000587256 MMS19Q96T76 1030 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 TSG101Q99816 390 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 GTPBP4Q9BZE4 634 aaKnown RBP15.91■□□□□ 0.14
ATG4D-207ENST00000587256 CRISPLD1Q9H336 500 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 C11orf16Q9NQ32 467 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 DDX43Q9NXZ2 648 aaKnown RBP15.91■□□□□ 0.14
ATG4D-207ENST00000587256 ABI2Q9NYB9 513 aaPredicted RBP15.91■□□□□ 0.14
ATG4D-207ENST00000587256 CDH7Q9ULB5 785 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 SLC27A5Q9Y2P5 690 aa15.91■□□□□ 0.14
ATG4D-207ENST00000587256 GPR37L1O60883 481 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 AKAP3O75969 853 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 LAMP2P13473 410 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 KRT13P13646 458 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ACAT1P24752 427 aaKnown RBP15.9■□□□□ 0.14
ATG4D-207ENST00000587256 PCSK1P29120 753 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 PRCPP42785 496 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 EPHB3P54753 998 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 SMARCB1Q12824 385 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 STIM1Q13586 685 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 NFIL3Q16649 462 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 SOWAHAQ2M3V2 549 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 EDRF1Q3B7T1 1238 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 MGAT5BQ3V5L5 792 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ZCWPW2Q504Y3 356 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 CYP4A22Q5TCH4 519 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 TDRD10Q5VZ19 366 aaKnown RBP15.9■□□□□ 0.14
ATG4D-207ENST00000587256 PDZD4Q76G19 769 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-207ENST00000587256 OSTM1Q86WC4 334 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 FAM186BQ8IYM0 893 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 TTC9BQ8N6N2 239 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ITFG1Q8TB96 612 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 SPATA18Q8TC71 538 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 C2orf15Q8WU43 125 aaKnown RBP15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ZNF516Q92618 1163 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 FGF13Q92913 245 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 SYAP1Q96A49 352 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ASAH2Q9NR71 780 aa15.9■□□□□ 0.14
ATG4D-207ENST00000587256 ZFP37Q9Y6Q3 630 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-207ENST00000587256 MAPK13O15264 365 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 SOAT2O75908 522 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 MYL4P12829 197 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 PSMC2P35998 433 aaKnown RBP15.89■□□□□ 0.13
ATG4D-207ENST00000587256 LHX1P48742 406 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 MYL6P60660 151 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 DLG4P78352 724 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 SIGLEC14Q08ET2 396 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 ADAM9Q13443 819 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 VEPH1Q14D04 833 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 NFE2Q16621 373 aaPredicted RBP15.89■□□□□ 0.13
ATG4D-207ENST00000587256 SLC5A9Q2M3M2 681 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 WDR72Q3MJ13 1102 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 INTS6LQ5JSJ4 861 aaKnown RBP15.89■□□□□ 0.13
ATG4D-207ENST00000587256 TRIM67Q6ZTA4 783 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 INTS8Q75QN2 995 aaKnown RBP15.89■□□□□ 0.13
ATG4D-207ENST00000587256 DPH6Q7L8W6 267 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 NPAS3Q8IXF0 933 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 ELOA2Q8IYF1 753 aaPredicted RBP15.89■□□□□ 0.13
ATG4D-207ENST00000587256 UBALD2Q8IYN6 164 aa15.89■□□□□ 0.13
ATG4D-207ENST00000587256 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms