RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 STIM1Q13586 685 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 SCARA3Q6AZY7 606 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 CLEC17AQ6ZS10 378 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 INTS8Q75QN2 995 aaKnown RBP14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 GRASPQ7Z6J2 395 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 OR10T2Q8NGX3 314 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 PLEKHO2Q8TD55 490 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 TMC2Q8TDI7 906 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 ZNF516Q92618 1163 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 RTP3Q9BQQ7 232 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 ZCWPW1Q9H0M4 648 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 HSFX1Q9UBD0 423 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 MUTYHQ9UIF7 546 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 L1RE1Q9UN81 338 aa14.29□□□□□ -0.12
SMARCA4-210ENST00000586892 MTMR11A4FU01 709 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 IKBKBO14920 756 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 PHACTR2O75167 634 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 AKAP3O75969 853 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 STAU1O95793 577 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 CST3P01034 146 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 ATICP31939 592 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 PSMC2P35998 433 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 LHX1P48742 406 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 MYL7Q01449 175 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 TSPY1Q01534 308 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 PLD1Q13393 1074 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 SLC39A12Q504Y0 691 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 CENPPQ6IPU0 288 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 ADGRF2Q8IZF7 708 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 ELMOD1Q8N336 334 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 C2orf15Q8WU43 125 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 IPO9Q96P70 1041 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 PGLYRP2Q96PD5 576 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 TMEM209Q96SK2 561 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 NOTCH4Q99466 2003 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 TSG101Q99816 390 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 C1QTNF1Q9BXJ1 281 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 EPHX3Q9H6B9 360 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 ZFP37Q9Y6Q3 630 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-210ENST00000586892 GABRDO14764 452 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 PSMA7O14818 248 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 CETN3O15182 167 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 N4BP1O75113 896 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 VNN2O95498 520 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 C4BPAP04003 597 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 KRT13P13646 458 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 PTPN2P17706 415 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 FSHRP23945 695 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 PCSK1P29120 753 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 GBP2P32456 591 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 VAMP7P51809 220 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 LRRC63Q05C16 580 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 DUSP4Q13115 394 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 BIRC3Q13489 604 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 PTPN21Q16825 1174 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 SOWAHAQ2M3V2 549 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 PABPC1LQ4VXU2 614 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 TDRD10Q5VZ19 366 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 GET4Q7L5D6 327 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 LIMS2Q7Z4I7 341 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 DCP1BQ8IZD4 617 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 SYAP1Q96A49 352 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 MKNK1Q9BUB5 465 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 AVENQ9NQS1 362 aaPredicted RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 DDX43Q9NXZ2 648 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 EPS15L1Q9UBC2 864 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 DNMT3BQ9UBC3 853 aaKnown RBP14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 YIPF1Q9Y548 306 aa14.27□□□□□ -0.13
SMARCA4-210ENST00000586892 RHOP08100 348 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 FAM163BP0C2L3 166 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 ALDH1A3P47895 512 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 TUFMP49411 452 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 MYL6P60660 151 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 TNNC1P63316 161 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 DLG4P78352 724 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 NTHL1P78549 312 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 TWF1Q12792 350 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 NCOA4Q13772 614 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 ZACNQ401N2 412 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 IQCEQ6IPM2 695 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 ATAD1Q8NBU5 361 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 SPPL2BQ8TCT7 592 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 ZNF512Q96ME7 567 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 MYADMQ96S97 322 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 MMS19Q96T76 1030 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 XYLT2Q9H1B5 865 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 CRISPLD1Q9H336 500 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 HCFC1R1Q9NWW0 138 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 LIMD1Q9UGP4 676 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 SORCS3Q9UPU3 1222 aa14.26□□□□□ -0.13
SMARCA4-210ENST00000586892 TACC1O75410 805 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms