RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 DEFB115Q30KQ5 88 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 LLGL2Q6P1M3 1020 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 PHLDB2Q86SQ0 1253 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 RSPH3Q86UC2 560 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 CPNE8Q86YQ8 564 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 IFT20Q8IY31 132 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 KRT222Q8N1A0 295 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 LRRC52Q8N7C0 313 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 TMEM176AQ96HP8 235 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 ELOVL4Q9GZR5 314 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 CXCL16Q9H2A7 254 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 XPNPEP3Q9NQH7 507 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 GDF3Q9NR23 364 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 BARX2Q9UMQ3 279 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-208ENST00000586548 TRPV2Q9Y5S1 764 aa23.66■■□□□ 1.38
CIRBP-208ENST00000586548 RAD51CO43502 376 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 RPLP2P05387 115 aaKnown RBP23.65■■□□□ 1.38
CIRBP-208ENST00000586548 ITGA4P13612 1032 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 RWDD2BP57060 319 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 CAP1Q01518 475 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 GDF6Q6KF10 455 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-208ENST00000586548 FAM228AQ86W67 206 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 WDTC1Q8N5D0 677 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 TWNKQ96RR1 684 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 CFHR5Q9BXR6 569 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 TRIM7Q9C029 511 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 LCMT1Q9UIC8 334 aa23.65■■□□□ 1.38
CIRBP-208ENST00000586548 UBQLN1Q9UMX0 589 aaKnown RBP23.65■■□□□ 1.38
CIRBP-208ENST00000586548 GOLGA6L10A0A0M3HER8 536 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 TLR3O15455 904 aaKnown RBP23.64■■□□□ 1.38
CIRBP-208ENST00000586548 MYBL2P10244 700 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 XKR4Q5GH76 650 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 DENND1BQ6P3S1 775 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 ERICH1Q86X53 443 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 FEZF2Q8TBJ5 459 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 APOL6Q9BWW8 343 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 TUBGCP4Q9UGJ1 667 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 HMGXB4Q9UGU5 601 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 CDY2AQ9Y6F7 541 aa23.64■■□□□ 1.38
CIRBP-208ENST00000586548 SART1O43290 800 aaKnown RBP23.64■■□□□ 1.37
CIRBP-208ENST00000586548 GLI1P08151 1106 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 VDRP11473 427 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 PRKAR2AP13861 404 aaKnown RBP23.64■■□□□ 1.37
CIRBP-208ENST00000586548 KCNE1P15382 129 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 CST5P28325 142 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-208ENST00000586548 CCND3P30281 292 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-208ENST00000586548 MAN1A1P33908 653 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 SESTD1Q86VW0 696 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 KLHDC9Q8NEP7 349 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 AENQ8WTP8 325 aaKnown RBP23.64■■□□□ 1.37
CIRBP-208ENST00000586548 PLVAPQ9BX97 442 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 DDX47Q9H0S4 455 aaKnown RBP23.64■■□□□ 1.37
CIRBP-208ENST00000586548 RNF186Q9NXI6 227 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 STRIP2Q9ULQ0 834 aa23.64■■□□□ 1.37
CIRBP-208ENST00000586548 SCN1AP35498 2009 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 TCRBV5S1A1TA0A578 114 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 XPOTO43592 962 aaKnown RBP23.63■■□□□ 1.37
CIRBP-208ENST00000586548 AKAP5P24588 427 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 TAP1Q03518 808 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 RPAINQ86UA6 219 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 SERINC5Q86VE9 423 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 CCDC26Q8TAB7 109 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-208ENST00000586548 KIAA1257Q9ULG3 409 aa23.63■■□□□ 1.37
CIRBP-208ENST00000586548 CD4P01730 458 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 PYGMP11217 842 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 ELNP15502 786 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 PLA2G4AP47712 749 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 GUCY2DQ02846 1103 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 CASP8Q14790 479 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 FAM47CQ5HY64 1035 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 GLRA4Q5JXX5 417 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 DNAJC24Q6P3W2 148 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 GSPT2Q8IYD1 628 aaKnown RBP23.62■■□□□ 1.37
CIRBP-208ENST00000586548 C18orf25Q96B23 403 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-208ENST00000586548 PARP2Q9UGN5 583 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 SRRDQ9UH36 339 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 IP6K2Q9UHH9 426 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.62■■□□□ 1.37
CIRBP-208ENST00000586548 IPPQ9Y573 584 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 SMIM28A0A1B0GU29 152 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 ASGR1P07306 291 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 ATF7P17544 494 aaPredicted RBP23.62■■□□□ 1.37
CIRBP-208ENST00000586548 NDST1P52848 882 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 EPHB4P54760 987 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 ORC1Q13415 861 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 CNGA2Q16280 664 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 C9orf57Q5W0N0 161 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 AADACL2Q6P093 401 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 MAATS1Q7Z4T9 603 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 SMG8Q8ND04 991 aaKnown RBP23.62■■□□□ 1.37
CIRBP-208ENST00000586548 C3orf20Q8ND61 904 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 HINFPQ9BQA5 517 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 EPB41L5Q9HCM4 733 aa23.62■■□□□ 1.37
CIRBP-208ENST00000586548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.62■■□□□ 1.37
CIRBP-208ENST00000586548 THSD7BQ9C0I4 1608 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 A0A0U1RQG5 324 aaPredicted RBP23.61■■□□□ 1.37
CIRBP-208ENST00000586548 TMEM191CA6NGB0 347 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 PPEF2O14830 753 aa23.61■■□□□ 1.37
CIRBP-208ENST00000586548 PSTPIP1O43586 416 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms