RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ACO1P21399 889 aaKnown RBP18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 RAP1GAPP47736 663 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 LHX1P48742 406 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 CDH8P55286 799 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 METTL23Q86XA0 190 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 SHC3Q92529 594 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 MRPL45Q9BRJ2 306 aaKnown RBP18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 ZBP1Q9H171 429 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 CISHQ9NSE2 258 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 PUF60Q9UHX1 559 aaKnown RBP18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 MTUS1Q9ULD2 1270 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 CNTN6Q9UQ52 1028 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 TRIOBPQ9H2D6 2365 aa18.14■□□□□ 0.49
PRKCSH-203ENST00000586486 TMEM265A0A087WTH1 108 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 CILPO75339 1184 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 GLUD2P49448 558 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 JAM2P57087 298 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 DSG1Q02413 1049 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 YWHAHQ04917 246 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 MRPL58Q14197 206 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 RTP2Q5QGT7 225 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 VARS2Q5ST30 1063 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 OVOS1Q6IE37 1185 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 PDXDC1Q6P996 788 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 TAS1R1Q7RTX1 841 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 VPS52Q8N1B4 723 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 SPPL3Q8TCT6 385 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 PIK3R5Q8WYR1 880 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 STK33Q9BYT3 514 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 MYO6Q9UM54 1294 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 BARX2Q9UMQ3 279 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 TIMM13Q9Y5L4 95 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 CHD7Q9P2D1 2997 aa18.13■□□□□ 0.49
PRKCSH-203ENST00000586486 F8VZ95 297 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 GYPCP04921 128 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 RAPGEF1Q13905 1077 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 ANKS3Q6ZW76 656 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 UNC93AQ86WB7 457 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 OSTM1Q86WC4 334 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 OXCT2Q9BYC2 517 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 GPR88Q9GZN0 384 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 STXBP5LQ9Y2K9 1186 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 URODP06132 367 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 CTSAP10619 480 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 CD58P19256 250 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 DRAP1Q14919 205 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 ARHGAP44Q17R89 818 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 KIAA0319Q5VV43 1072 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 ZNF280DQ6N043 979 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 CACNA2D4Q7Z3S7 1137 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 TMC6Q7Z403 805 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 CEP57Q86XR8 500 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 BAP1Q92560 729 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 B3GALT6Q96L58 329 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 SNX25Q9H3E2 840 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 ALG13Q9NP73 1137 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 NLRC4Q9NPP4 1024 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 DDX43Q9NXZ2 648 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 CAPN11Q9UMQ6 739 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 SSX2IPQ9Y2D8 614 aa18.12■□□□□ 0.49
PRKCSH-203ENST00000586486 H7C4K7 107 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 PCSK1P29120 753 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 GNL1P36915 607 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 ZNF132P52740 706 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 NDST1P52848 882 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 TBX2Q13207 712 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 GPM6BQ13491 265 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 KIAA1841Q6NSI8 718 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 THEM5Q8N1Q8 247 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 OR6B3Q8NGW1 331 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 LNX1Q8TBB1 728 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 WHAMMQ8TF30 809 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 POF1BQ8WVV4 589 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 SPAG5Q96R06 1193 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 RTP3Q9BQQ7 232 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 ACBD6Q9BR61 282 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 LMAN2LQ9H0V9 348 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 TLR9Q9NR96 1032 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 MTRRQ9UBK8 725 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 NME7Q9Y5B8 376 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 BACE2Q9Y5Z0 518 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 IRAK3Q9Y616 596 aa18.11■□□□□ 0.49
PRKCSH-203ENST00000586486 A8MXQ7 604 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 GRM6O15303 877 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 TBC1D4O60343 1298 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 DNAJB1P25685 340 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 CREMQ03060 361 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 PTPN14Q15678 1187 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 FMNL3Q8IVF7 1028 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 FAM71AQ8IYT1 594 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 RIN2Q8WYP3 895 aaPredicted RBP18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 CERS4Q9HA82 394 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 MRPL17Q9NRX2 175 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 HMGXB4Q9UGU5 601 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 PCDHB4Q9Y5E5 795 aa18.1■□□□□ 0.49
PRKCSH-203ENST00000586486 ATG2AQ2TAZ0 1938 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms