RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 JAM2P57087 298 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 BPIFB4P59827 614 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 LRMPQ12912 555 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 BIRC3Q13489 604 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 ASIC2Q16515 512 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 AAK1Q2M2I8 961 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 BEST2Q8NFU1 509 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 LMO3Q8TAP4 145 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 CALR3Q96L12 384 aaKnown RBP13.54□□□□□ -0.24
VMP1-202ENST00000585847 ZNF558Q96NG5 402 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 FAM193BQ96PV7 902 aaPredicted RBP13.54□□□□□ -0.24
VMP1-202ENST00000585847 EIF3CQ99613 913 aaKnown RBP13.54□□□□□ -0.24
VMP1-202ENST00000585847 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 TSGA10Q9BZW7 698 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 SIX2Q9NPC8 291 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 FAN1Q9Y2M0 1017 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 TSC2P49815 1807 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 BDP1A6H8Y1 2624 aa13.54□□□□□ -0.24
VMP1-202ENST00000585847 RFXAPO00287 272 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 LPXNO60711 386 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 LCA5LO95447 670 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 ITGB3P05106 788 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SLC9A1P19634 815 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
VMP1-202ENST00000585847 CTNNB1P35222 781 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SOX5P35711 763 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 PIK3CAP42336 1068 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 BRCC3P46736 316 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 AARSP49588 968 aaKnown RBP eCLIP13.53□□□□□ -0.24
VMP1-202ENST00000585847 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 RAPGEF1Q13905 1077 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 CAMK1Q14012 370 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SPA17Q15506 151 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SGSM1Q2NKQ1 1148 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SPOUT1Q5T280 376 aaKnown RBP13.53□□□□□ -0.24
VMP1-202ENST00000585847 TAS1R1Q7RTX1 841 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 UBE2Q2Q8WVN8 375 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 ELMO3Q96BJ8 720 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
VMP1-202ENST00000585847 UROC1Q96N76 676 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 SAMD11Q96NU1 681 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 GPR62Q9BZJ7 368 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 DEF6Q9H4E7 631 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 MYO1AQ9UBC5 1043 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
VMP1-202ENST00000585847 GRM6O15303 877 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 PHACTR2O75167 634 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 FGF18O76093 207 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 NDUFA10O95299 355 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 ASS1P00966 412 aaKnown RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 RB1P06400 928 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 ALDH7A1P49419 539 aaKnown RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 TRPC3Q13507 836 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 NCOA4Q13772 614 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 BMS1Q14692 1282 aaKnown RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 TIGD5Q53EQ6 642 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 DCLRE1AQ6PJP8 1040 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 ZNF677Q86XU0 584 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 TAS1R2Q8TE23 839 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 HASPINQ8TF76 798 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 SHC3Q92529 594 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 SEMA4DQ92854 862 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 XYLT2Q9H1B5 865 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 SPG21Q9NZD8 308 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 RAPGEFL1Q9UHV5 662 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 ADAM28Q9UKQ2 775 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 AGAP1Q9UPQ3 857 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 RWDD3Q9Y3V2 267 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.25
VMP1-202ENST00000585847 EPN1Q9Y6I3 576 aaPredicted RBP13.52□□□□□ -0.25
VMP1-202ENST00000585847 MYO7AQ13402 2215 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 H3BNC9 293 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 I3L4J1 428 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
VMP1-202ENST00000585847 EPHB6O15197 1021 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 B3GAT3O94766 335 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 HLA-DRAP01903 254 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 PNPLA4P41247 253 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 KLK7P49862 253 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 KLHL30Q0D2K2 578 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 FUT10Q6P4F1 479 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 WDR59Q6PJI9 974 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 LRRC52Q8N7C0 313 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 FBXO22Q8NEZ5 403 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 GDPD5Q8WTR4 605 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 ARNTL2Q8WYA1 636 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 COLEC11Q9BWP8 271 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 NIF3L1Q9GZT8 377 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 NHEJ1Q9H9Q4 299 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms