RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 PSMA7O14818 248 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 FGFR3P22607 806 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 TNFSF9P41273 254 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 ENOX2Q16206 610 aaKnown RBP25.02■■□□□ 1.6
LSM7-203ENST00000585409 RTL10Q7L3V2 364 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 NT5DC4Q86YG4 428 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 NPAS3Q8IXF0 933 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 ERCC4Q92889 916 aaPredicted RBP25.02■■□□□ 1.6
LSM7-203ENST00000585409 SAAL1Q96ER3 474 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 DDX27Q96GQ7 796 aaKnown RBP25.02■■□□□ 1.6
LSM7-203ENST00000585409 IKZF4Q9H2S9 585 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 HCFC1R1Q9NWW0 138 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 RBAKQ9NYW8 714 aaPredicted RBP25.02■■□□□ 1.6
LSM7-203ENST00000585409 UBQLN1Q9UMX0 589 aaKnown RBP25.02■■□□□ 1.6
LSM7-203ENST00000585409 POLIQ9UNA4 740 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 TRAF3IP3Q9Y228 551 aa25.02■■□□□ 1.6
LSM7-203ENST00000585409 EXOC3O60645 756 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 OR1D2P34982 312 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 PFKPQ01813 784 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 SLC9A9Q8IVB4 645 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 BRSK2Q8IWQ3 736 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 TMEM174Q8WUU8 243 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 KIF12Q96FN5 646 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 PPP1R10Q96QC0 940 aaKnown RBP25.01■■□□□ 1.59
LSM7-203ENST00000585409 KXD1Q9BQD3 176 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 KCTD10Q9H3F6 313 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 SPATA6Q9NWH7 488 aaPredicted RBP25.01■■□□□ 1.59
LSM7-203ENST00000585409 DNMT3BQ9UBC3 853 aaKnown RBP25.01■■□□□ 1.59
LSM7-203ENST00000585409 MTRRQ9UBK8 725 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 MAPK8IP1Q9UQF2 711 aa25.01■■□□□ 1.59
LSM7-203ENST00000585409 CLIC2O15247 247 aa25■■□□□ 1.59
LSM7-203ENST00000585409 SPTLC1O15269 473 aa25■■□□□ 1.59
LSM7-203ENST00000585409 ADRB2P07550 413 aa25■■□□□ 1.59
LSM7-203ENST00000585409 MAGEA9P43362 315 aa25■■□□□ 1.59
LSM7-203ENST00000585409 CYP2J2P51589 502 aa25■■□□□ 1.59
LSM7-203ENST00000585409 MORC3Q14149 939 aa25■■□□□ 1.59
LSM7-203ENST00000585409 PABPC1LQ4VXU2 614 aaKnown RBP25■■□□□ 1.59
LSM7-203ENST00000585409 GLRA4Q5JXX5 417 aa25■■□□□ 1.59
LSM7-203ENST00000585409 ZBTB41Q5SVQ8 909 aa25■■□□□ 1.59
LSM7-203ENST00000585409 BEST2Q8NFU1 509 aa25■■□□□ 1.59
LSM7-203ENST00000585409 SYAP1Q96A49 352 aaPredicted RBP25■■□□□ 1.59
LSM7-203ENST00000585409 DHTKD1Q96HY7 919 aaPredicted RBP25■■□□□ 1.59
LSM7-203ENST00000585409 LTB4R2Q9NPC1 389 aa25■■□□□ 1.59
LSM7-203ENST00000585409 FAM170BA6NMN3 283 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 LACTBL1A8MY62 500 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 LAMTOR5O43504 91 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 NR3C1P04150 777 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 CYP3A5P20815 502 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 IGFBP6P24592 240 aaPredicted RBP24.99■■□□□ 1.59
LSM7-203ENST00000585409 RPL9P32969 192 aaKnown RBP24.99■■□□□ 1.59
LSM7-203ENST00000585409 TMEM132DQ14C87 1099 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 UBXN2BQ14CS0 331 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 NFIL3Q16649 462 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 EDRF1Q3B7T1 1238 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 CD300LGQ6UXG3 332 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 USP37Q86T82 979 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 GPT2Q8TD30 523 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 CACTINQ8WUQ7 758 aaKnown RBP24.99■■□□□ 1.59
LSM7-203ENST00000585409 CLDN23Q96B33 292 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 FRMD4BQ9Y2L6 1034 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 C2CD2Q9Y426 696 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 BACE2Q9Y5Z0 518 aa24.99■■□□□ 1.59
LSM7-203ENST00000585409 GOLGA8IPA6NC78 632 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 GOLGA8JA6NMD2 632 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 TULP1O00294 542 aaPredicted RBP24.98■■□□□ 1.59
LSM7-203ENST00000585409 BIN1O00499 593 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 PRCPP42785 496 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 SNRNP35Q16560 246 aaKnown RBP24.98■■□□□ 1.59
LSM7-203ENST00000585409 CRELD2Q6UXH1 353 aaPredicted RBP24.98■■□□□ 1.59
LSM7-203ENST00000585409 SMYD4Q8IYR2 804 aaPredicted RBP24.98■■□□□ 1.59
LSM7-203ENST00000585409 NELL1Q92832 810 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 DACH1Q9UI36 760 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 PCDHGA2Q9Y5H1 932 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 CDY1Q9Y6F8 540 aa24.98■■□□□ 1.59
LSM7-203ENST00000585409 NCOR2Q9Y618 2525 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 BICDL2A1A5D9 508 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 ECI2O75521 394 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 CD72P21854 359 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 LRRC63Q05C16 580 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 ISM2Q6H9L7 571 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 ZBTB44Q8NCP5 570 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 ING5Q8WYH8 240 aa24.97■■□□□ 1.59
LSM7-203ENST00000585409 AVENQ9NQS1 362 aaPredicted RBP24.97■■□□□ 1.59
LSM7-203ENST00000585409 TRAPPC3O43617 180 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 B3GAT3O94766 335 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 PAX3P23760 479 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 NR2F2P24468 414 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 CLCNKBP51801 687 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 CSTF1Q05048 431 aaKnown RBP24.96■■□□□ 1.59
LSM7-203ENST00000585409 UPP1Q16831 310 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 SLC5A9Q2M3M2 681 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 CCDC183Q5T5S1 534 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 CENPPQ6IPU0 288 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 POTEHQ6S545 545 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 ANKS3Q6ZW76 656 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 ZMAT2Q96NC0 199 aaKnown RBP24.96■■□□□ 1.59
LSM7-203ENST00000585409 FNBP1Q96RU3 617 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 NELL2Q99435 816 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 GDE1Q9NZC3 331 aa24.96■■□□□ 1.59
LSM7-203ENST00000585409 R3HCC1Q9Y3T6 440 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms