RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CLUHO75153 1309 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 C2CD4DB7Z1M9 353 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 GABRDO14764 452 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 FAM163BP0C2L3 166 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ATICP31939 592 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 PSMC2P35998 433 aaKnown RBP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 LRRC63Q05C16 580 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ADCY1Q08828 1119 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 SMARCB1Q12824 385 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 SOWAHAQ2M3V2 549 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 TDRD10Q5VZ19 366 aaKnown RBP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 FOXR2Q6PJQ5 311 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 INTS8Q75QN2 995 aaKnown RBP17.47■□□□□ 0.39
ERBB2-222ENST00000584908 RNF135Q8IUD6 432 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 ZDHHC14Q8IZN3 488 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 THEM5Q8N1Q8 247 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 XYLT2Q9H1B5 865 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 VRTNQ9H8Y1 702 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 INSL5Q9Y5Q6 135 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 SNX9Q9Y5X1 595 aa17.47■□□□□ 0.39
ERBB2-222ENST00000584908 MTMR11A4FU01 709 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 PI4K2BG5E9Z4 385 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 PRRG1O14668 218 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 CCL16O15467 120 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 OR4Q2P0C623 313 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 CCNE1P24864 410 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 DLG4P78352 724 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 ZACNQ401N2 412 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 OTOP3Q7RTS5 596 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 FAM186BQ8IYM0 893 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 PLCD3Q8N3E9 789 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 TRIML1Q8N9V2 468 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 DHTKD1Q96HY7 919 aaPredicted RBP17.46■□□□□ 0.38
ERBB2-222ENST00000584908 TMEM209Q96SK2 561 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 ACBD6Q9BR61 282 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 PIDD1Q9HB75 910 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 CYP4F11Q9HBI6 524 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 AVENQ9NQS1 362 aaPredicted RBP17.46■□□□□ 0.38
ERBB2-222ENST00000584908 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.38
ERBB2-222ENST00000584908 PSMA7O14818 248 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 CETN3O15182 167 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 N4BP1O75113 896 aaKnown RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 CD44P16070 742 aaKnown RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 LHX1P48742 406 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 VAMP7P51809 220 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 STIM1Q13586 685 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 ANKRD40Q6AI12 368 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 TDRD5Q8NAT2 981 aaKnown RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 C2orf15Q8WU43 125 aaKnown RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 KBTBD7Q8WVZ9 684 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 ACSF2Q96CM8 615 aaPredicted RBP17.45■□□□□ 0.38
ERBB2-222ENST00000584908 CRISPLD1Q9H336 500 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 KIAA1468Q9P260 1216 aa17.45■□□□□ 0.38
ERBB2-222ENST00000584908 PTPRDP23468 1912 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 PPP1R3GB7ZBB8 358 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 SLC16A3O15427 465 aaKnown RBP17.44■□□□□ 0.38
ERBB2-222ENST00000584908 TACC1O75410 805 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 VNN1O95497 513 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 LRG1P02750 347 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 MYL6P60660 151 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 TRPC3Q13507 836 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 SLC39A12Q504Y0 691 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 SV2AQ7L0J3 742 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 GRASPQ7Z6J2 395 aaPredicted RBP17.44■□□□□ 0.38
ERBB2-222ENST00000584908 LRRTM3Q86VH5 581 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 OSTM1Q86WC4 334 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 DCP1BQ8IZD4 617 aaKnown RBP17.44■□□□□ 0.38
ERBB2-222ENST00000584908 ADGRF2Q8IZF7 708 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 TSG101Q99816 390 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 DDX43Q9NXZ2 648 aaKnown RBP17.44■□□□□ 0.38
ERBB2-222ENST00000584908 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.44■□□□□ 0.38
ERBB2-222ENST00000584908 EPS15L1Q9UBC2 864 aa17.44■□□□□ 0.38
ERBB2-222ENST00000584908 DNMT3BQ9UBC3 853 aaKnown RBP17.44■□□□□ 0.38
ERBB2-222ENST00000584908 DCXO43602 365 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 PHACTR2O75167 634 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 KRT13P13646 458 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 ALADP13716 330 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 WARSP23381 471 aaKnown RBP17.43■□□□□ 0.38
ERBB2-222ENST00000584908 MYL7Q01449 175 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 DUSP4Q13115 394 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 BIRC3Q13489 604 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 NCOA4Q13772 614 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 WDR72Q3MJ13 1102 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 ISM2Q6H9L7 571 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 ATAD1Q8NBU5 361 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 SPPL2BQ8TCT7 592 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 PGLYRP2Q96PD5 576 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 GBP4Q96PP9 640 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 CLSTN2Q9H4D0 955 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 YIPF1Q9Y548 306 aa17.43■□□□□ 0.38
ERBB2-222ENST00000584908 ZFP37Q9Y6Q3 630 aaPredicted RBP17.43■□□□□ 0.38
ERBB2-222ENST00000584908 TRIM49BA6NDI0 452 aa17.42■□□□□ 0.38
ERBB2-222ENST00000584908 EPB41P11171 864 aaKnown RBP17.42■□□□□ 0.38
ERBB2-222ENST00000584908 PTPN2P17706 415 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms