RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TKTP29401 623 aaKnown RBP19.57■□□□□ 0.72
RFFL-211ENST00000584541 DRAP1Q14919 205 aaPredicted RBP19.57■□□□□ 0.72
RFFL-211ENST00000584541 LRIT3Q3SXY7 679 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 OVOS1Q6IE37 1185 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 PDXDC1Q6P996 788 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 LIMS2Q7Z4I7 341 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 FBXO22Q8NEZ5 403 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 CPLX3Q8WVH0 158 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 KAT5Q92993 513 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 TIFAQ96CG3 184 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 MRPL45Q9BRJ2 306 aaKnown RBP19.57■□□□□ 0.72
RFFL-211ENST00000584541 TTPALQ9BTX7 342 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 SDCBP2Q9H190 292 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 MYO6Q9UM54 1294 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 CAPN11Q9UMQ6 739 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 LZTS1Q9Y250 596 aa19.57■□□□□ 0.72
RFFL-211ENST00000584541 LUC7L2Q9Y383 392 aaKnown RBP19.57■□□□□ 0.72
RFFL-211ENST00000584541 TIMM13Q9Y5L4 95 aaPredicted RBP19.57■□□□□ 0.72
RFFL-211ENST00000584541 H7C4K7 107 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 ARHGEF15O94989 841 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 KRT5P13647 590 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 GNL1P36915 607 aaPredicted RBP19.56■□□□□ 0.72
RFFL-211ENST00000584541 USP8P40818 1118 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 STAT1P42224 750 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 UBE3AQ05086 875 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 INCA1Q0VD86 236 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 UNC93AQ86WB7 457 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 RNF168Q8IYW5 571 aaPredicted RBP19.56■□□□□ 0.72
RFFL-211ENST00000584541 SHC3Q92529 594 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 TTYH3Q9C0H2 523 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 NUCKS1Q9H1E3 243 aaKnown RBP19.56■□□□□ 0.72
RFFL-211ENST00000584541 IMPACTQ9P2X3 320 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 AJAP1Q9UKB5 411 aaPredicted RBP19.56■□□□□ 0.72
RFFL-211ENST00000584541 BARX2Q9UMQ3 279 aaPredicted RBP19.56■□□□□ 0.72
RFFL-211ENST00000584541 SSX2IPQ9Y2D8 614 aa19.56■□□□□ 0.72
RFFL-211ENST00000584541 A8MXQ7 604 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 F8VZ95 297 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 EFEMP2O95967 443 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 GYPCP04921 128 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 URODP06132 367 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 PCSK1P29120 753 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 CASP14P31944 242 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 GLUD2P49448 558 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 ZBED6P86452 979 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 VARS2Q5ST30 1063 aaKnown RBP19.55■□□□□ 0.72
RFFL-211ENST00000584541 ZNF280DQ6N043 979 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 TMEM270Q6UE05 265 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 ANKS3Q6ZW76 656 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 VPS52Q8N1B4 723 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 KBTBD7Q8WVZ9 684 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 NT5C1AQ9BXI3 368 aa19.55■□□□□ 0.72
RFFL-211ENST00000584541 OXCT2Q9BYC2 517 aaPredicted RBP19.55■□□□□ 0.72
RFFL-211ENST00000584541 DDX43Q9NXZ2 648 aaKnown RBP19.55■□□□□ 0.72
RFFL-211ENST00000584541 GABRDO14764 452 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 CILPO75339 1184 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 OAZ2O95190 189 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 CCDC172P0C7W6 258 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 ACO1P21399 889 aaKnown RBP19.54■□□□□ 0.72
RFFL-211ENST00000584541 NDST1P52848 882 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 JAM2P57087 298 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 GPM6BQ13491 265 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 TSR1Q2NL82 804 aaKnown RBP19.54■□□□□ 0.72
RFFL-211ENST00000584541 TAS1R1Q7RTX1 841 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 CNGA4Q8IV77 575 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 UBR7Q8N806 425 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 SPC24Q8NBT2 197 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 RIN2Q8WYP3 895 aaPredicted RBP19.54■□□□□ 0.72
RFFL-211ENST00000584541 TNIP3Q96KP6 325 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 VN1R3Q9BXE9 311 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
RFFL-211ENST00000584541 CHST7Q9NS84 486 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 STXBP5LQ9Y2K9 1186 aa19.54■□□□□ 0.72
RFFL-211ENST00000584541 AKR1B15C9JRZ8 316 aaPredicted RBP19.53■□□□□ 0.72
RFFL-211ENST00000584541 H3BNC9 293 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 FOXN3O00409 490 aaPredicted RBP19.53■□□□□ 0.72
RFFL-211ENST00000584541 PDGFRBP09619 1106 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 KRT9P35527 623 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 SOX5P35711 763 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 DSG1Q02413 1049 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 CREMQ03060 361 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 TBX2Q13207 712 aaPredicted RBP19.53■□□□□ 0.72
RFFL-211ENST00000584541 CTXN3Q4LDR2 81 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 ZNF394Q53GI3 561 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 RTP2Q5QGT7 225 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 SFMBT2Q5VUG0 894 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 OSTM1Q86WC4 334 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 GPR65Q8IYL9 337 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 RBBP8NLQ8NC74 664 aaPredicted RBP19.53■□□□□ 0.72
RFFL-211ENST00000584541 SPPL3Q8TCT6 385 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 POF1BQ8WVV4 589 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 ARNTL2Q8WYA1 636 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 PIK3R5Q8WYR1 880 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 BAP1Q92560 729 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 B3GALT6Q96L58 329 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 ACBD6Q9BR61 282 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 ZBP1Q9H171 429 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 CERS4Q9HA82 394 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 MRPL17Q9NRX2 175 aaKnown RBP19.53■□□□□ 0.72
RFFL-211ENST00000584541 CNTN6Q9UQ52 1028 aa19.53■□□□□ 0.72
RFFL-211ENST00000584541 OR6C75A6NL08 312 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms