RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 LEMD2Q8NC56 503 aa29.21■■■□□ 2.27
SMARCD2-210ENST00000584400 AVENQ9NQS1 362 aaPredicted RBP29.21■■■□□ 2.27
SMARCD2-210ENST00000584400 DNMT3BQ9UBC3 853 aaKnown RBP29.21■■■□□ 2.27
SMARCD2-210ENST00000584400 BDP1A6H8Y1 2624 aa29.2■■■□□ 2.27
SMARCD2-210ENST00000584400 LAMP2P13473 410 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 ALDH1A3P47895 512 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 LHX1P48742 406 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 TWF1Q12792 350 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 CEP135Q66GS9 1140 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 CENPPQ6IPU0 288 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 PDCL2Q8N4E4 241 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 OR10T2Q8NGX3 314 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 MYADMQ96S97 322 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 CDH7Q9ULB5 785 aa29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 MRPS23Q9Y3D9 190 aaKnown RBP29.2■■■□□ 2.26
SMARCD2-210ENST00000584400 MTMR11A4FU01 709 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 ZNF197O14709 1029 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 MAPK13O15264 365 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 N4BP1O75113 896 aaKnown RBP29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 PHACTR2O75167 634 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 RHOP08100 348 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 NR2F2P24468 414 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 TUFMP49411 452 aaKnown RBP29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 EPHB3P54753 998 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 SIGLEC14Q08ET2 396 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 DUSP4Q13115 394 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 CYP4A22Q5TCH4 519 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 ZNF658Q5TYW1 1059 aaPredicted RBP29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 TRIM67Q6ZTA4 783 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 PARD3BQ8TEW8 1205 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 ACBD6Q9BR61 282 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 LRFN3Q9BTN0 628 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 KCNK12Q9HB15 430 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 DDX43Q9NXZ2 648 aaKnown RBP29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 L1RE1Q9UN81 338 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 YIPF1Q9Y548 306 aa29.19■■■□□ 2.26
SMARCD2-210ENST00000584400 ASGR2P07307 311 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 NTHL1P78549 312 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 TDGQ13569 410 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 SLC39A12Q504Y0 691 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 SPPL2BQ8TCT7 592 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 FAM84AQ96KN4 292 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 C11orf16Q9NQ32 467 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 HCFC1R1Q9NWW0 138 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 DENND4AQ7Z401 1863 aa29.18■■■□□ 2.26
SMARCD2-210ENST00000584400 FAM86C2PA6NEL3 165 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 PCSK1P29120 753 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 ATICP31939 592 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 CLDN10P78369 228 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 NFE2Q16621 373 aaPredicted RBP29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 PDZD4Q76G19 769 aaPredicted RBP29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 ADGRF2Q8IZF7 708 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 ATAD1Q8NBU5 361 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 SPATA20Q8TB22 786 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 TMC2Q8TDI7 906 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 SYAP1Q96A49 352 aaPredicted RBP29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 TMEM209Q96SK2 561 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 RTP3Q9BQQ7 232 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 CORO1BQ9BR76 489 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 ASB3Q9Y575 518 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 PCDHA5Q9Y5H7 936 aa29.17■■■□□ 2.26
SMARCD2-210ENST00000584400 BIRC3Q13489 604 aa29.16■■■□□ 2.26
SMARCD2-210ENST00000584400 EDRF1Q3B7T1 1238 aa29.16■■■□□ 2.26
SMARCD2-210ENST00000584400 COBLL1Q53SF7 1204 aa29.16■■■□□ 2.26
SMARCD2-210ENST00000584400 FGF13Q92913 245 aa29.16■■■□□ 2.26
SMARCD2-210ENST00000584400 C5orf42Q9H799 3197 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 C2orf16Q68DN1 1984 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 IKBKBO14920 756 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 MICAL2O94851 1124 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 STAU1O95793 577 aaKnown RBP29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 CST3P01034 146 aaPredicted RBP29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 FAM163BP0C2L3 166 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 PSMC2P35998 433 aaKnown RBP29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 TNNC1P63316 161 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 ADAM9Q13443 819 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 INTS8Q75QN2 995 aaKnown RBP29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 MTSS1LQ765P7 747 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 ITIH5Q86UX2 942 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 ZNF516Q92618 1163 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 MMS19Q96T76 1030 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 TSG101Q99816 390 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 ASAH2Q9NR71 780 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 GDE1Q9NZC3 331 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 SLC27A5Q9Y2P5 690 aa29.15■■■□□ 2.26
SMARCD2-210ENST00000584400 LRRIQ3A6PVS8 624 aaPredicted RBP29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 VNN2O95498 520 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 KRT13P13646 458 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 PPP1R2P41236 205 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 CASP4P49662 377 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 UBE2HP62256 183 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 ENPEPQ07075 957 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 STIM1Q13586 685 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 VEPH1Q14D04 833 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 SOWAHAQ2M3V2 549 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 MGAT5BQ3V5L5 792 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 ITFG1Q8TB96 612 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 SEPT5Q99719 369 aaPredicted RBP29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 GZF1Q9H116 711 aaPredicted RBP29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 CEP72Q9P209 647 aa29.14■■■□□ 2.26
SMARCD2-210ENST00000584400 PCDHB5Q9Y5E4 795 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms