RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	LONRF1	Q17RB8	773 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TNFAIP8L3	Q5GJ75	292 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CAPRIN2	Q6IMN6	1127 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TAOK1	Q7L7X3	1001 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TAX1BP1	Q86VP1	789 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	EXD1	Q8NHP7	514 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	FEZF2	Q8TBJ5	459 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DNAJC17	Q9NVM6	304 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GPRC5D	Q9NZD1	345 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ANAPC5	Q9UJX4	755 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MAF	O75444	373 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ASS1	P00966	412 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	EFNA5	P52803	228 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CCDC38	Q502W7	563 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	HIBCH	Q6NVY1	386 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZNF365	Q70YC5	407 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	EEPD1	Q7L9B9	569 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	WDR49	Q8IV35	697 aa		14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MRPL4	Q9BYD3	311 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CPSF2	Q9P2I0	782 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SOWAHB	A6NEL2	793 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TOM1L1	O75674	476 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MMP8	P22894	467 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	EDNRB	P24530	442 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZNF132	P52740	706 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	AP3M2	P53677	418 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	VGLL4	Q14135	290 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	NCAPG2	Q86XI2	1143 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RIOX2	Q8IUF8	465 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SEPT1	Q8WYJ6	367 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MTMR12	Q9C0I1	747 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	IP6K2	Q9UHH9	426 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	C15orf41	Q9Y2V0	281 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SNCAIP	Q9Y6H5	919 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SI	P14410	1827 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MSC	O60682	206 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	USP2	O75604	605 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TTC4	O95801	387 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	HIRA	P54198	1017 aa	Predicted RBP	13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RPL7A	P62424	266 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	METTL7B	Q6UX53	244 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ANKS1B	Q7Z6G8	1248 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CCDC89	Q8N998	374 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CCT6B	Q92526	530 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MTFR1L	Q9H019	292 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KLHL11	Q9NVR0	708 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	NEU2	Q9Y3R4	380 aa		13.99	□□□□□ -0.17
CSNK1D-222	ENST00000584377	FAM189A1	O60320	539 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ANP32D	O95626	131 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SRGAP2C	P0DJJ0	459 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PECAM1	P16284	738 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MARK3	P27448	753 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CETN2	P41208	172 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MYL6	P60660	151 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KYNU	Q16719	465 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZFYVE27	Q5T4F4	411 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	UBR7	Q8N806	425 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SERPINB12	Q96P63	405 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PRMT1	Q99873	361 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TGFB3	P10600	412 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	NFX1	Q12986	1120 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LY6K	Q17RY6	165 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ZNF394	Q53GI3	561 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CHADL	Q6NUI6	762 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GSTA5	Q7RTV2	222 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	EXOC3L1	Q86VI1	746 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CNKSR2	Q8WXI2	1034 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	P3H4	Q92791	437 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ITFG2	Q969R8	447 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SPATC1L	Q9H0A9	340 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LOC285556	D6RIA3	1793 aa		13.98	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TMEM191C	A6NGB0	347 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PI4K2B	G5E9Z4	385 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CALB1	P05937	261 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TMEM191B	P0C7N4	346 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GRM1	Q13255	1194 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ATP13A4	Q4VNC1	1196 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	IER5	Q5VY09	327 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	RNF149	Q8NC42	400 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	BBOF1	Q8ND07	529 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	ARHGEF2	Q92974	986 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	FAM167A	Q96KS9	214 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	PWWP2A	Q96N64	755 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	NIF3L1	Q9GZT8	377 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	KDM4C	Q9H3R0	1056 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CISH	Q9NSE2	258 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	OGT	O15294	1046 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LSM8	O95777	96 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	GHR	P10912	638 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	TCF4	P15884	667 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	CDC25C	P30307	473 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	IFNAR2	P48551	515 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	LAMTOR4	Q0VGL1	99 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	MAPK6	Q16659	721 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	DUOXA2	Q1HG44	320 aa		13.97	□□□□□ -0.17
CSNK1D-222	ENST00000584377	IZUMO3	Q5VZ72	239 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms