RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 XKR4Q5GH76 650 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 ANO7Q6IWH7 933 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 SLC23A3Q6PIS1 610 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 GAREM2Q75VX8 874 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 PIP4P1Q86T03 277 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 TTC30AQ86WT1 665 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 DRC1Q96MC2 740 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 LRRC3BQ96PB8 259 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 UBL7Q96S82 380 aaPredicted RBP12.13□□□□□ -0.47
CASC3-208ENST00000583649 KIF2CQ99661 725 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 GTPBP2Q9BX10 602 aaKnown RBP12.13□□□□□ -0.47
CASC3-208ENST00000583649 TPSD1Q9BZJ3 242 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 TDP1Q9NUW8 608 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 SLC6A14Q9UN76 642 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 TNFSF13BQ9Y275 285 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 INVSQ9Y283 1065 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
CASC3-208ENST00000583649 ARHGEF35A5YM69 484 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 XPOTO43592 962 aaKnown RBP12.12□□□□□ -0.47
CASC3-208ENST00000583649 CDKL5O76039 1030 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 PRAMEF12O95522 483 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 PAX3P23760 479 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 OSTNP61366 133 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 SLC14A1Q13336 389 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 LYSMD4Q5XG99 296 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 EEF1DP3Q658K8 133 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 ALKAL1Q6UXT8 129 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 PIK3AP1Q6ZUJ8 805 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 WHAMMQ8TF30 809 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 ATP2A3Q93084 1043 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 JAKMIP1Q96N16 626 aaKnown RBP12.12□□□□□ -0.47
CASC3-208ENST00000583649 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 DNAJC25Q9H1X3 360 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 TUFT1Q9NNX1 390 aa12.12□□□□□ -0.47
CASC3-208ENST00000583649 ARID2Q68CP9 1835 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 CAPN8A6NHC0 703 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 AP5Z1O43299 807 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 MCF2P10911 925 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 IGFBP6P24592 240 aaPredicted RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 PDIA3P30101 505 aaKnown RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 HSPA4P34932 840 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 SOX4Q06945 474 aaPredicted RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 SMARCB1Q12824 385 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 TRIP6Q15654 476 aaKnown RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 RASSF3Q86WH2 238 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 ADAMTS14Q8WXS8 1223 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 SEPT5Q99719 369 aaPredicted RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 POLMQ9NP87 494 aaPredicted RBP12.11□□□□□ -0.47
CASC3-208ENST00000583649 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 CNTN3Q9P232 1028 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
CASC3-208ENST00000583649 SLC27A5Q9Y2P5 690 aa12.11□□□□□ -0.47
CASC3-208ENST00000583649 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 M0QZQ0 153 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 CAPNS1P04632 268 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 SERPINF2P08697 491 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 CYP11B2P19099 503 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 GJA4P35212 333 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 IFNAR2P48551 515 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 CYP4F8P98187 520 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 HSF5Q4G112 596 aaPredicted RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 TRIM68Q6AZZ1 485 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 C2orf15Q8WU43 125 aaKnown RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 SLC46A2Q9BY10 475 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 ECT2Q9H8V3 914 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 DUS2Q9NX74 493 aaKnown RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 KCNG1Q9UIX4 513 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
CASC3-208ENST00000583649 GCN1Q92616 2671 aaKnown RBP12.1□□□□□ -0.47
CASC3-208ENST00000583649 DSPP15924 2871 aaKnown RBP12.09□□□□□ -0.47
CASC3-208ENST00000583649 DMXL2Q8TDJ6 3036 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 LAMA1P25391 3075 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 MTMR11A4FU01 709 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 CAPN9O14815 690 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 NEMFO60524 1076 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 ODC1P11926 461 aa12.09□□□□□ -0.47
CASC3-208ENST00000583649 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms