RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 CCDC163A0A0D9SF12 145 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 MATN2O00339 956 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 LAD1O00515 517 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 KCNK3O14649 394 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 NPHP1O15259 732 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 AP5Z1O43299 807 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 RANBP6O60518 1105 aaKnown RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 BBOX1O75936 387 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 NPTXRO95502 500 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 MMEP08473 750 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TNNT1P13805 278 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 CDK11BP21127 795 aaKnown RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 SDHAP31040 664 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 UBASH3AP57075 661 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 DUSP8Q13202 625 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 ORC2Q13416 577 aaPredicted RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 ITPK1Q13572 414 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TUBB2AQ13885 445 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 SEC23AQ15436 765 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 NRN1LQ496H8 165 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 FILIP1LQ4L180 1135 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TRIM61Q5EBN2 209 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 KANK2Q63ZY3 851 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TMEM200BQ69YZ2 307 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 ZNF804AQ7Z570 1209 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 RTKN2Q8IZC4 609 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 LCORLQ8N3X6 602 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 AOPEPQ8N6M6 819 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 IQUBQ8NA54 791 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 CCDC148Q8NFR7 591 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TBC1D22AQ8WUA7 517 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 NUP133Q8WUM0 1156 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 CACTINQ8WUQ7 758 aaKnown RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 ASB15Q8WXK1 588 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 PHKBQ93100 1093 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 SMARCE1Q969G3 411 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 FEZ1Q99689 392 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 RIOK1Q9BRS2 568 aaKnown RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TUBB2BQ9BVA1 445 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 AMNQ9BXJ7 453 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 NAA15Q9BXJ9 866 aaKnown RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 KIAA1683Q9H0B3 1180 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TCP11L1Q9NUJ3 509 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 UCKL1Q9NWZ5 548 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 SFMBT1Q9UHJ3 866 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 ASB1Q9Y576 335 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 HS3ST3A1Q9Y663 406 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 TIAM2Q8IVF5 1701 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 DDX60Q8IY21 1712 aaKnown RBP5.08□□□□□ -1.6
PTPRM-215ENST00000583289 DOT1LQ8TEK3 1739 aa5.08□□□□□ -1.6
PTPRM-215ENST00000583289 SLIT2O94813 1529 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 TNKSO95271 1327 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 NEDD4P46934 1319 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 SPATA31A6Q5VVP1 1343 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 PHLPP1O60346 1717 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 A0A0G2JLW4 131 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 BTBD18B2RXH4 712 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 hCG_1984214I3L0E3 225 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 SCDO00767 359 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CTIFO43310 598 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 STX10O60499 249 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 HIP1RO75146 1068 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 MAFO75444 373 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 WDHD1O75717 1129 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 TOP1P11387 765 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 MARCKSP29966 332 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 RFC4P35249 363 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 PLCD1P51178 756 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CD83Q01151 205 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 SPAG1Q07617 926 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 POSTNQ15063 836 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 PCOLCEQ15113 449 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 TBR1Q16650 682 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 LONRF3Q496Y0 759 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 USP39Q53GS9 565 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 SOGA3Q5TF21 947 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 OTUD7BQ6GQQ9 843 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 GRAMD4Q6IC98 578 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CTR9Q6PD62 1173 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 SHC4Q6S5L8 630 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 C11orf57Q6ZUT1 292 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 LARP4Q71RC2 724 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 FILIP1Q7Z7B0 1213 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 DZIP1Q86YF9 867 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 ZNF444Q8N0Y2 327 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CCAR2Q8N163 923 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 ZNF713Q8N859 430 aaPredicted RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 HIPK4Q8NE63 616 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 ZSWIM2Q8NEG5 633 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CALML6Q8TD86 181 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CCDC47Q96A33 483 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 NSUN4Q96CB9 384 aaKnown RBP5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CCDC51Q96ER9 411 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 ZNF503Q96F45 646 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 NELFAQ9H3P2 528 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 CUEDC2Q9H467 287 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 KAT14Q9H8E8 782 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 MAGEF1Q9HAY2 307 aa5.07□□□□□ -1.6
PTPRM-215ENST00000583289 SNTG2Q9NY99 539 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms