RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CST3P01034 146 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 GBP2P32456 591 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 AP3M2P53677 418 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 DLG4P78352 724 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 NTHL1P78549 312 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 GPR17Q13304 367 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 ADAM9Q13443 819 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 STIM1Q13586 685 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 EDRF1Q3B7T1 1238 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 SLC39A12Q504Y0 691 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 ZCWPW2Q504Y3 356 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 FAM186BQ8IYM0 893 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 TMEM86AQ8N2M4 240 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 RTP3Q9BQQ7 232 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 GDAP2Q9NXN4 497 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 MAFFQ9ULX9 164 aa13.54□□□□□ -0.24
SMARCE1-218ENST00000582955 MTMR11A4FU01 709 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 BIN1O00499 593 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 PSMA7O14818 248 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 CETN3O15182 167 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 MAPK13O15264 365 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 POU2F2P09086 479 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 KRT13P13646 458 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 ALADP13716 330 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 FSHRP23945 695 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 VAMP7P51809 220 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 CDR1P51861 262 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 TNNC1P63316 161 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 MYL7Q01449 175 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 TSPY1Q01534 308 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 TWF1Q12792 350 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 DUSP4Q13115 394 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 CAMK4Q16566 473 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 COBLL1Q53SF7 1204 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 TDRD10Q5VZ19 366 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 INTS8Q75QN2 995 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 ZDHHC14Q8IZN3 488 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 ELMOD1Q8N336 334 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 ZCWPW1Q9H0M4 648 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 HCFC1R1Q9NWW0 138 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 DDX43Q9NXZ2 648 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 SLC27A5Q9Y2P5 690 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
SMARCE1-218ENST00000582955 PI4K2BG5E9Z4 385 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 VNN2O95498 520 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 PTPN2P17706 415 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 ACAT1P24752 427 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 PPP1R2P41236 205 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 LHX1P48742 406 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 MYL6P60660 151 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 CLDN10P78369 228 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 SOWAHAQ2M3V2 549 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 PABPC1LQ4VXU2 614 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 IQCEQ6IPM2 695 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 CENPPQ6IPU0 288 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 KLHL10Q6JEL2 608 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 DCP1BQ8IZD4 617 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 ATAD1Q8NBU5 361 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 SYAP1Q96A49 352 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 GBP4Q96PP9 640 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 MYADMQ96S97 322 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 CORO1BQ9BR76 489 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 CRISPLD1Q9H336 500 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 DNMT3BQ9UBC3 853 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 NXF1Q9UBU9 619 aaKnown RBP13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
SMARCE1-218ENST00000582955 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 N4BP1O75113 896 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 C4BPAP04003 597 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ASGR2P07307 311 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 RHOP08100 348 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 TRIM49P0CI25 452 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 TRIM49CP0CI26 452 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 EPB41P11171 864 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ATICP31939 592 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ALDH1A3P47895 512 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 LRRC63Q05C16 580 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 PLD1Q13393 1074 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 NCOA4Q13772 614 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 MORC3Q14149 939 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ZNF699Q32M78 642 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 WDR72Q3MJ13 1102 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 MGAT5BQ3V5L5 792 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 ANKRD40Q6AI12 368 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 LRRTM3Q86VH5 581 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
SMARCE1-218ENST00000582955 TTC9BQ8N6N2 239 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms