RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TMEM173Q86WV6 379 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 SUGP1Q8IWZ8 645 aaKnown RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 LRRC52Q8N7C0 313 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 C1orf127Q8N9H9 656 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 BCL7CQ8WUZ0 217 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 EEF2KMTQ96G04 330 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 ZNF830Q96NB3 372 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 PANX2Q96RD6 677 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 PAAF1Q9BRP4 392 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 HERC2P3Q9BVR0 1158 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 VPS16Q9H269 839 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 RRAGDQ9NQL2 400 aaPredicted RBP14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 TLR9Q9NR96 1032 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 SSX2IPQ9Y2D8 614 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 DNAH14Q0VDD8 3507 aa14.49□□□□□ -0.09
CSNK1D-220ENST00000581737 KMT2EQ8IZD2 1858 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 PTPRJQ12913 1337 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 ANO9A1A5B4 782 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 ZSCAN12O43309 604 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 PHACTR2O75167 634 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 SOD2P04179 222 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 ITGB3P05106 788 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 URODP06132 367 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 AVPR2P30518 371 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 POLR2BP30876 1174 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 TAF6P49848 677 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 GUCY2FP51841 1108 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 SIGLEC14Q08ET2 396 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 TBX2Q13207 712 aaPredicted RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 BIRC3Q13489 604 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 SV2CQ496J9 727 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 LMBRD2Q68DH5 695 aaPredicted RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 PDXDC1Q6P996 788 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 APTXQ7Z2E3 356 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 TRAPPC11Q7Z392 1133 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 GPR65Q8IYL9 337 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 VPS52Q8N1B4 723 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 ZNF397Q8NF99 534 aaPredicted RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 OR5B17Q8NGF7 314 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 SUSD6Q92537 303 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 RABGGTAQ92696 567 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 PPP2R3CQ969Q6 453 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 BORCS6Q96GS4 357 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 PHF7Q9BWX1 381 aaPredicted RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 NGRNQ9NPE2 291 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 ENTPD7Q9NQZ7 604 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 SPTLC3Q9NUV7 552 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 CDH22Q9UJ99 828 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 SCN1AP35498 2009 aa14.48□□□□□ -0.09
CSNK1D-220ENST00000581737 H0Y858 1186 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 PIRO00625 290 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 KRT19P08727 400 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 PBX1P40424 430 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 GLUD2P49448 558 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 MARSP56192 900 aaKnown RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 MCCD1P59942 119 aaPredicted RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 CREMQ03060 361 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 MYO1EQ12965 1108 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 TRPC3Q13507 836 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 SMC1AQ14683 1233 aaKnown RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 USP41Q3LFD5 358 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 DCAF17Q5H9S7 520 aaPredicted RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 TCERG1LQ5VWI1 586 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 KIAA1841Q6NSI8 718 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 TMC7Q7Z402 723 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 PLEKHO2Q8TD55 490 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 HASPINQ8TF76 798 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 SUSD3Q96L08 255 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 PCMTD1Q96MG8 357 aaPredicted RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 BAG1Q99933 345 aaPredicted RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 TCF25Q9BQ70 676 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 KCND1Q9NSA2 647 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 ZNHIT6Q9NWK9 470 aaKnown RBP14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 AGAP1Q9UPQ3 857 aa14.47□□□□□ -0.09
CSNK1D-220ENST00000581737 F8W810 466 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 SYN3O14994 580 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 N4BP1O75113 896 aaKnown RBP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 EFEMP2O95967 443 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 TRIM49P0CI25 452 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 TRIM49CP0CI26 452 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 CTSAP10619 480 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 ODC1P11926 461 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 ATICP31939 592 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 AARSP49588 968 aaKnown RBP eCLIP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 MXI1P50539 228 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 LILRA4P59901 499 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 ERVFC1P60507 584 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 DLG4P78352 724 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 CCZ1BP86790 482 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 CCZ1P86791 482 aaPredicted RBP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 LRMPQ12912 555 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 ZACNQ401N2 412 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 VWA3BQ502W6 1294 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 FAM171A1Q5VUB5 890 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 DSTYKQ6XUX3 929 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 RNF168Q8IYW5 571 aaPredicted RBP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 C3orf58Q8NDZ4 430 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms