RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 E2F4Q16254 413 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 SV2CQ496J9 727 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 C1orf210Q8IVY1 113 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 SYCP3Q8IZU3 236 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 PDILTQ8N807 584 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 SHKBP1Q8TBC3 707 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 C2orf15Q8WU43 125 aaKnown RBP22.58■■□□□ 1.21
CCDC42-203ENST00000581598 PSMG2Q969U7 264 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 E2F7Q96AV8 911 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 ZSWIM3Q96MP5 696 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 PYM1Q9BRP8 204 aaKnown RBP22.58■■□□□ 1.21
CCDC42-203ENST00000581598 SEMA4AQ9H3S1 761 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 LTB4R2Q9NPC1 389 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 ATP6V1DQ9Y5K8 247 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 PATJQ8NI35 1801 aa22.58■■□□□ 1.21
CCDC42-203ENST00000581598 PTPRZ1P23471 2315 aaPredicted RBP22.58■■□□□ 1.2
CCDC42-203ENST00000581598 KPNA7A9QM74 516 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 FGF19O95750 216 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 PSMC3P17980 439 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 TUFMP49411 452 aaKnown RBP22.57■■□□□ 1.2
CCDC42-203ENST00000581598 CNNM4Q6P4Q7 775 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 THEM5Q8N1Q8 247 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 ZSCAN18Q8TBC5 510 aaPredicted RBP22.57■■□□□ 1.2
CCDC42-203ENST00000581598 CACTINQ8WUQ7 758 aaKnown RBP22.57■■□□□ 1.2
CCDC42-203ENST00000581598 TRMT61BQ9BVS5 477 aaKnown RBP22.57■■□□□ 1.2
CCDC42-203ENST00000581598 FGFBP2Q9BYJ0 223 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 BCO2Q9BYV7 579 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 SLC27A5Q9Y2P5 690 aa22.57■■□□□ 1.2
CCDC42-203ENST00000581598 NUP210Q8TEM1 1887 aaPredicted RBP22.56■■□□□ 1.2
CCDC42-203ENST00000581598 F5P12259 2224 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 EXTL3O43909 919 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 CUTAO60888 179 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 WNT7BP56706 349 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 TEAD2Q15562 447 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 VITQ6UXI7 678 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 CLEC17AQ6ZS10 378 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 TPRG1Q6ZUI0 275 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 STXBP4Q6ZWJ1 553 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 DNAJB7Q7Z6W7 309 aaPredicted RBP22.56■■□□□ 1.2
CCDC42-203ENST00000581598 ITIH5Q86UX2 942 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 ZSWIM2Q8NEG5 633 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 IRF7Q92985 503 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 CLDN23Q96B33 292 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 SAAL1Q96ER3 474 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 CBWD1Q9BRT8 395 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 BRD9Q9H8M2 597 aa22.56■■□□□ 1.2
CCDC42-203ENST00000581598 RBAKQ9NYW8 714 aaPredicted RBP22.56■■□□□ 1.2
CCDC42-203ENST00000581598 TFIP11Q9UBB9 837 aaKnown RBP22.56■■□□□ 1.2
CCDC42-203ENST00000581598 FAM170BA6NMN3 283 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 LRRN2O75325 713 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 PRPF6O94906 941 aaKnown RBP22.55■■□□□ 1.2
CCDC42-203ENST00000581598 GJA1P17302 382 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 AMPD3Q01432 767 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 UBXN2BQ14CS0 331 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 SLC39A12Q504Y0 691 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 WSCD1Q658N2 575 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 ZNF852Q6ZMS4 543 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 MFSD6LQ8IWD5 586 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 TTC9BQ8N6N2 239 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 LRRC52Q8N7C0 313 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 C1orf127Q8N9H9 656 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 SPPL2BQ8TCT7 592 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 TRIM9Q9C026 710 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 ZNF334Q9HCZ1 680 aaPredicted RBP22.55■■□□□ 1.2
CCDC42-203ENST00000581598 HEBP1Q9NRV9 189 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 MRPS17Q9Y2R5 130 aaKnown RBP22.55■■□□□ 1.2
CCDC42-203ENST00000581598 MTF2Q9Y483 593 aaPredicted RBP22.55■■□□□ 1.2
CCDC42-203ENST00000581598 TICRRQ7Z2Z1 1910 aa22.55■■□□□ 1.2
CCDC42-203ENST00000581598 A0A1W2PRU2 124 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 SHISA7A6NL88 538 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 NCAM2O15394 837 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 SP9P0CG40 484 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 RPS9P46781 194 aaKnown RBP22.54■■□□□ 1.2
CCDC42-203ENST00000581598 TFAMQ00059 246 aaKnown RBP22.54■■□□□ 1.2
CCDC42-203ENST00000581598 GRM2Q14416 872 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 ATL3Q6DD88 541 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 SHC4Q6S5L8 630 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 GPD1LQ8N335 351 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 IQUBQ8NA54 791 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 CXorf38Q8TB03 319 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 SPATA18Q8TC71 538 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 ITGA11Q9UKX5 1188 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 VPS13AQ96RL7 3174 aa22.54■■□□□ 1.2
CCDC42-203ENST00000581598 MAN2B1O00754 1011 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 EIF3DO15371 548 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCDC42-203ENST00000581598 TARSP26639 723 aaKnown RBP22.53■■□□□ 1.2
CCDC42-203ENST00000581598 WEE1P30291 646 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 POLR2BP30876 1174 aaKnown RBP22.53■■□□□ 1.2
CCDC42-203ENST00000581598 VIPR2P41587 438 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 MLLT6P55198 1093 aaPredicted RBP22.53■■□□□ 1.2
CCDC42-203ENST00000581598 ZNF528Q3MIS6 628 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 GAREM2Q75VX8 874 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 LRRTM3Q86VH5 581 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 DCP1BQ8IZD4 617 aaKnown RBP22.53■■□□□ 1.2
CCDC42-203ENST00000581598 MAML2Q8IZL2 1156 aaPredicted RBP22.53■■□□□ 1.2
CCDC42-203ENST00000581598 SLITRK6Q9H5Y7 841 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 MAGEF1Q9HAY2 307 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 GDAP2Q9NXN4 497 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 FBXO4Q9UKT5 387 aa22.53■■□□□ 1.2
CCDC42-203ENST00000581598 AGAP1Q9UPQ3 857 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms