RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 THAP12O43422 761 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NDST1P52848 882 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 RAD23BP54727 409 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CDR2Q01850 454 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FPGSQ05932 587 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PAN2Q504Q3 1202 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 COL13A1Q5TAT6 717 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DCLRE1AQ6PJP8 1040 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DSTYKQ6XUX3 929 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 KIAA1328Q86T90 577 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ZNF677Q86XU0 584 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TOP6BLQ8N6T0 577 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SLC30A5Q8TAD4 765 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 RSPH1Q8WYR4 309 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PPP1R13BQ96KQ4 1090 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SENP8Q96LD8 212 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TWNKQ96RR1 684 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 MRPL9Q9BYD2 267 aaKnown RBP14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ELOVL4Q9GZR5 314 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 L1RE1Q9UN81 338 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PCDHA13Q9Y5I0 950 aa14.76□□□□□ -0.05
CDK5RAP3-219ENST00000580670 RIOK3O14730 519 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TACC1O75410 805 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 BAIAP3O94812 1187 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PAEPP09466 180 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 MAGEA1P43355 309 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 OR1G1P47890 313 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 WDR5P61964 334 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DEFB103AP81534 67 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FMO1Q01740 532 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ORC1Q13415 861 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CCDC122Q5T0U0 273 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ALKBH5Q6P6C2 394 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DPH6Q7L8W6 267 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 OTOP2Q7RTS6 562 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LIMS2Q7Z4I7 341 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 REXO1L1PQ8IX06 675 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ADGRF2Q8IZF7 708 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SLC4A11Q8NBS3 891 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 OR6B3Q8NGW1 331 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HASPINQ8TF76 798 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TOP1MTQ969P6 601 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMEM176AQ96HP8 235 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NT5C1AQ9BXI3 368 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SNX25Q9H3E2 840 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NRDE2Q9H7Z3 1164 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NAGPAQ9UK23 515 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 A0A0U1RQJ8 604 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 KIF4AO95239 1232 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CD19P15391 556 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SYN1P17600 705 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 BRD2P25440 801 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 GNL1P36915 607 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 AARSP49588 968 aaKnown RBP eCLIP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TIGD5Q53EQ6 642 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CD300LGQ6UXG3 332 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PALB2Q86YC2 1186 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PDCL2Q8N4E4 241 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 KBTBD7Q8WVZ9 684 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ATRIPQ8WXE1 791 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PCDHB18PQ96TA0 734 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LUC7LQ9NQ29 371 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NENFQ9UMX5 172 aa14.75□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FNDC1Q4ZHG4 1894 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMCO5BA8MYB1 307 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DGKIO75912 1065 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FGBP02675 491 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PAX3P23760 479 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 VAV2P52735 878 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 WSCD1Q658N2 575 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 UNC93AQ86WB7 457 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 LRRC43Q8N309 656 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ZNF606Q8WXB4 792 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TFAP2BQ92481 460 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TSC1Q92574 1164 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 HCSTQ9UBK5 93 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TFR2Q9UP52 801 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 PRG3Q9Y2Y8 225 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 NME7Q9Y5B8 376 aa14.74□□□□□ -0.05
CDK5RAP3-219ENST00000580670 GOLGA6L9A6NEM1 432 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 CCDC85CA6NKD9 419 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ZBBXA8MT70 800 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 A8MXQ7 604 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 F8W810 466 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 I3L4J1 428 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ITGB1P05556 798 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FAM163BP0C2L3 166 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 ODC1P11926 461 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 WARSP23381 471 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 BRCC3P46736 316 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 C10orf76Q5T2E6 689 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 FAM117BQ6P1L5 589 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMCO2Q7Z6W1 182 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 DNAAF5Q86Y56 855 aa14.73□□□□□ -0.05
CDK5RAP3-219ENST00000580670 TMEM86AQ8N2M4 240 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms