RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 ZNF558Q96NG5 402 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 STK39Q9UEW8 545 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 SIX4Q9UIU6 781 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 PCDHB12Q9Y5F1 795 aa13.05□□□□□ -0.32
CCDC84-209ENST00000580556 DMXL1Q9Y485 3027 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 TRIP11Q15643 1979 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 CASTOR2A6NHX0 329 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 VNN1O95497 513 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 ALDH2P05091 517 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 POLR2BP30876 1174 aaKnown RBP13.04□□□□□ -0.32
CCDC84-209ENST00000580556 SLC11A1P49279 550 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 AARSP49588 968 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC84-209ENST00000580556 GUCY2FP51841 1108 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 UBE3AQ05086 875 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 MYO1EQ12965 1108 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 TRPC3Q13507 836 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 CWF19L1Q69YN2 538 aaKnown RBP13.04□□□□□ -0.32
CCDC84-209ENST00000580556 KCNT2Q6UVM3 1135 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 COLGALT1Q8NBJ5 622 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 CDCA3Q99618 268 aaPredicted RBP13.04□□□□□ -0.32
CCDC84-209ENST00000580556 COLEC11Q9BWP8 271 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 XYLT2Q9H1B5 865 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 RBSNQ9H1K0 784 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
CCDC84-209ENST00000580556 R3HCC1Q9Y3T6 440 aaKnown RBP13.04□□□□□ -0.32
CCDC84-209ENST00000580556 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 NRP1O14786 923 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 PHACTR2O75167 634 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 B3GAT3O94766 335 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 KIF4AO95239 1232 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 ASS1P00966 412 aaKnown RBP13.03□□□□□ -0.32
CCDC84-209ENST00000580556 HLA-DRAP01903 254 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 PBX3P40426 434 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 PIK3CAP42336 1068 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 OR1G1P47890 313 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 TAF6P49848 677 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 LILRA4P59901 499 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 SGSM1Q2NKQ1 1148 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 UVSSAQ2YD98 709 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 SV2CQ496J9 727 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 FILIP1LQ4L180 1135 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 SMYD5Q6GMV2 418 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 CCDC150Q8NCX0 1101 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 TAS1R2Q8TE23 839 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 FAM84AQ96KN4 292 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 PAAF1Q9BRP4 392 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 IMPG2Q9BZV3 1241 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 MARCH5Q9NX47 278 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 RAB20Q9NX57 234 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 GDAP2Q9NXN4 497 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 SPG21Q9NZD8 308 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 AGAP1Q9UPQ3 857 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 FAN1Q9Y2M0 1017 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 NR2E1Q9Y466 385 aa13.03□□□□□ -0.32
CCDC84-209ENST00000580556 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 PPEF2O14830 753 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 EFEMP2O95967 443 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 SERPINC1P01008 464 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 CST3P01034 146 aaPredicted RBP13.02□□□□□ -0.33
CCDC84-209ENST00000580556 KRT19P08727 400 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 FANCCQ00597 558 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 PLCB3Q01970 1234 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 ELAVL2Q12926 359 aaKnown RBP13.02□□□□□ -0.33
CCDC84-209ENST00000580556 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 SARM1Q6SZW1 724 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 GBP6Q6ZN66 633 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
CCDC84-209ENST00000580556 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 FLCNQ8NFG4 579 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 IGSF21Q96ID5 467 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 HPDLQ96IR7 371 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 VPS16Q9H269 839 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 MFSD1Q9H3U5 465 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 FAM124BQ9H5Z6 455 aaPredicted RBP13.02□□□□□ -0.33
CCDC84-209ENST00000580556 MMRN2Q9H8L6 949 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
CCDC84-209ENST00000580556 GCNT4Q9P109 453 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 LZTS1Q9Y250 596 aa13.02□□□□□ -0.33
CCDC84-209ENST00000580556 PRG3Q9Y2Y8 225 aaPredicted RBP13.02□□□□□ -0.33
CCDC84-209ENST00000580556 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.333e-7■■■■■ 114.9
CCDC84-209ENST00000580556 KPNA7A9QM74 516 aa13.01□□□□□ -0.33
CCDC84-209ENST00000580556 M0QZQ0 153 aa13.01□□□□□ -0.33
CCDC84-209ENST00000580556 TULP1O00294 542 aaPredicted RBP13.01□□□□□ -0.33
CCDC84-209ENST00000580556 TADA2AO75478 443 aa13.01□□□□□ -0.33
CCDC84-209ENST00000580556 TPM3P06753 285 aa13.01□□□□□ -0.33
CCDC84-209ENST00000580556 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
CCDC84-209ENST00000580556 P4HA1P13674 534 aa13.01□□□□□ -0.33
CCDC84-209ENST00000580556 NPR3P17342 541 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms