RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GBF1Q92538 1859 aa15.27■□□□□ 0.03
SKA2-205ENST00000580541 OR6C75A6NL08 312 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 A8MXQ7 604 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 ADCY5O95622 1261 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 WEE2P0C1S8 567 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 CTSAP10619 480 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 CDC25BP30305 580 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 PBX1P40424 430 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 ASPAP45381 313 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 TSPY1Q01534 308 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 DSG1Q02413 1049 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 SMARCB1Q12824 385 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 RAPGEF1Q13905 1077 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 MAPRE1Q15691 268 aaKnown RBP15.26■□□□□ 0.03
SKA2-205ENST00000580541 ZNF280DQ6N043 979 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 TMEM173Q86WV6 379 aaPredicted RBP15.26■□□□□ 0.03
SKA2-205ENST00000580541 VSTM4Q8IW00 320 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 RNF168Q8IYW5 571 aaPredicted RBP15.26■□□□□ 0.03
SKA2-205ENST00000580541 POF1BQ8WVV4 589 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 PPP2R3CQ969Q6 453 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 ACBD6Q9BR61 282 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 NT5C1AQ9BXI3 368 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 EMILIN2Q9BXX0 1053 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 ZNF576Q9H609 170 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 SIX2Q9NPC8 291 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 TLR9Q9NR96 1032 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 CISHQ9NSE2 258 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 L1RE1Q9UN81 338 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 POLIQ9UNA4 740 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 LUC7L2Q9Y383 392 aaKnown RBP15.26■□□□□ 0.03
SKA2-205ENST00000580541 PCDHB4Q9Y5E5 795 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 NLRC5Q86WI3 1866 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 MYO9BQ13459 2157 aa15.26■□□□□ 0.03
SKA2-205ENST00000580541 A0A1W2PQJ5 194 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 F8W810 466 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 I3L4J1 428 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 GABRDO14764 452 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 LRRN2O75325 713 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 CXCL14O95715 111 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 EFEMP2O95967 443 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 TKTP29401 623 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 STAT1P42224 750 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 INCA1Q0VD86 236 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 MRPL58Q14197 206 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 SMC1AQ14683 1233 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 ARHGAP44Q17R89 818 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 CTXN3Q4LDR2 81 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 VARS2Q5ST30 1063 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 SCARA3Q6AZY7 606 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 SCARA5Q6ZMJ2 495 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 ARHGEF19Q8IW93 802 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 DCP1BQ8IZD4 617 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 TMEM130Q8N3G9 435 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 RIN2Q8WYP3 895 aaPredicted RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 PIK3R5Q8WYR1 880 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 ALG13Q9NP73 1137 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 ENTPD7Q9NQZ7 604 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 DDX43Q9NXZ2 648 aaKnown RBP15.25■□□□□ 0.03
SKA2-205ENST00000580541 CDH9Q9ULB4 789 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 STXBP5LQ9Y2K9 1186 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 BACE2Q9Y5Z0 518 aa15.25■□□□□ 0.03
SKA2-205ENST00000580541 NOL4O94818 638 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 KRT5P13647 590 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 CD58P19256 250 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 CA8P35219 290 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 USP8P40818 1118 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 CDH8P55286 799 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 PTK2Q05397 1052 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 DRAP1Q14919 205 aaPredicted RBP15.24■□□□□ 0.03
SKA2-205ENST00000580541 KIAA0319Q5VV43 1072 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 IQCEQ6IPM2 695 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 GPR153Q6NV75 609 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 BCL7CQ8WUZ0 217 aaPredicted RBP15.24■□□□□ 0.03
SKA2-205ENST00000580541 TCF25Q9BQ70 676 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 NAA15Q9BXJ9 866 aaKnown RBP15.24■□□□□ 0.03
SKA2-205ENST00000580541 ZBP1Q9H171 429 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 GANQ9H2C0 597 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 NLRC4Q9NPP4 1024 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 FNIP2Q9P278 1114 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 IMPACTQ9P2X3 320 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 CAPN11Q9UMQ6 739 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 TIMM13Q9Y5L4 95 aaPredicted RBP15.24■□□□□ 0.03
SKA2-205ENST00000580541 FHOD1Q9Y613 1164 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 IRAK3Q9Y616 596 aa15.24■□□□□ 0.03
SKA2-205ENST00000580541 KIAA1671Q9BY89 1806 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 CILPO75339 1184 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 C1RP00736 705 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 PAEPP09466 180 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 PDGFRBP09619 1106 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 IGFBP6P24592 240 aaPredicted RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 KLK7P49862 253 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 NDST1P52848 882 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 ZBED6P86452 979 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 PSMD5Q16401 504 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 NFE2Q16621 373 aaPredicted RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 TAS1R1Q7RTX1 841 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms