RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 ITGB1P05556 798 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 MSNP26038 577 aaKnown RBP12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 CA8P35219 290 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 PBX1P40424 430 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 PBX2P40425 430 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 STAT1P42224 750 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 POLR2FP61218 127 aaKnown RBP12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 DSG1Q02413 1049 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 KCNMA1Q12791 1236 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 SOWAHAQ2M3V2 549 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 VARS2Q5ST30 1063 aaKnown RBP12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 SPOPLQ6IQ16 392 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 PHLDB3Q6NSJ2 640 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 RRAGAQ7L523 313 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 TMC7Q7Z402 723 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 LIMS2Q7Z4I7 341 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 CNGA4Q8IV77 575 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 ARNTL2Q8WYA1 636 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 FAM84AQ96KN4 292 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 ACBD6Q9BR61 282 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 NT5C1AQ9BXI3 368 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 GPR62Q9BZJ7 368 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 APOBEC3GQ9HC16 384 aaKnown RBP12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 IMPACTQ9P2X3 320 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 CACNG4Q9UBN1 327 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 DPP7Q9UHL4 492 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 CDH9Q9ULB4 789 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 KIAA1257Q9ULG3 409 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 L1RE1Q9UN81 338 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 LUC7L2Q9Y383 392 aaKnown RBP12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 PCDHB4Q9Y5E5 795 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 BACE2Q9Y5Z0 518 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
SNORD3C-201ENST00000580533 MED7O43513 233 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 PAEPP09466 180 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 LINC00271P0C7V0 271 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 CTSAP10619 480 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 KRT5P13647 590 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 CD58P19256 250 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 TKTP29401 623 aaKnown RBP12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 STILQ15468 1287 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 PSMD5Q16401 504 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 CTXN3Q4LDR2 81 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 ZNF697Q5TEC3 545 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 CD300LGQ6UXG3 332 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 TMC6Q7Z403 805 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 MICAL1Q8TDZ2 1067 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 POF1BQ8WVV4 589 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 RIN2Q8WYP3 895 aaPredicted RBP12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 TATDN2Q93075 761 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 ZBP1Q9H171 429 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 GANQ9H2C0 597 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 ZNF576Q9H609 170 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 SMYD3Q9H7B4 428 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 SIX2Q9NPC8 291 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.54□□□□□ -0.41e-14■■■■■ 39.8
SNORD3C-201ENST00000580533 CHST7Q9NS84 486 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 DDX43Q9NXZ2 648 aaKnown RBP12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 FNIP2Q9P278 1114 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
SNORD3C-201ENST00000580533 RBAK-RBAKDNI3L0D1 243 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 I3L4J1 428 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 GABRDO14764 452 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 NRDCO43847 1150 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 CILPO75339 1184 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 EFEMP2O95967 443 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 C1RP00736 705 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 ADH1AP07327 375 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 WEE2P0C1S8 567 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 USP8P40818 1118 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 NDUFV1P49821 464 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 SLC8A3P57103 927 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 ZBED6P86452 979 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 PTK2Q05397 1052 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 DRAP1Q14919 205 aaPredicted RBP12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 NFE2Q16621 373 aaPredicted RBP12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 IQCEQ6IPM2 695 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 ARHGEF19Q8IW93 802 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 SPPL3Q8TCT6 385 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 C2orf15Q8WU43 125 aaKnown RBP12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 BCL7CQ8WUZ0 217 aaPredicted RBP12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 SHC3Q92529 594 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 TMEM176AQ96HP8 235 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 NAA15Q9BXJ9 866 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms