RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TMED2Q15363 201 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF568Q3ZCX4 644 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 PLEKHA7Q6IQ23 1121 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 EMC1Q8N766 993 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 RUNDC3BQ96NL0 473 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 TRAIPQ9BWF2 469 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 KIAA1586Q9HCI6 787 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 SAYSD1Q9NPB0 183 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 CISHQ9NSE2 258 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 NAALADL1Q9UQQ1 740 aa11.1□□□□□ -0.63
TOP3A-209ENST00000580095 PSME4Q14997 1843 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 SOWAHBA6NEL2 793 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 MYBL1P10243 752 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-209ENST00000580095 ARSEP51690 589 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 GPS1Q13098 491 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 FAM47EQ6ZV65 393 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 COPS5Q92905 334 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 IMPG2Q9BZV3 1241 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 KLC4Q9NSK0 619 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 SAMD15Q9P1V8 674 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF112Q9UJU3 913 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 STYXL1Q9Y6J8 313 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 ADGRA2Q96PE1 1338 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 CCT8L1PA6NM43 557 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 ADCY3O60266 1144 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 DNAJC24Q6P3W2 148 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 GADL1Q6ZQY3 521 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 MOB2Q70IA6 237 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 TAOK1Q7L7X3 1001 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 ANKMY2Q8IV38 441 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 WDTC1Q8N5D0 677 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 MRPL47Q9HD33 250 aaKnown RBP11.09□□□□□ -0.63
TOP3A-209ENST00000580095 PARVAQ9NVD7 372 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 NEU2Q9Y3R4 380 aa11.09□□□□□ -0.63
TOP3A-209ENST00000580095 COL11A1P12107 1806 aaPredicted RBP11.09□□□□□ -0.63
TOP3A-209ENST00000580095 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.63
TOP3A-209ENST00000580095 INO80B-WBP1J3KQ70 363 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 MMP8P22894 467 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 MCCD1P59942 119 aaPredicted RBP11.08□□□□□ -0.63
TOP3A-209ENST00000580095 IGBP1P78318 339 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 VGLL4Q14135 290 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 CCNG2Q16589 344 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 TNFAIP8L3Q5GJ75 292 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 GJC2Q5T442 439 aaPredicted RBP11.08□□□□□ -0.63
TOP3A-209ENST00000580095 SLFN12LQ6IEE8 588 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 ZNF677Q86XU0 584 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 SLCO2A1Q92959 643 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 TRIM11Q96F44 468 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 FAM81BQ96LP2 452 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 INO80BQ9C086 356 aaPredicted RBP11.08□□□□□ -0.63
TOP3A-209ENST00000580095 VPS33BQ9H267 617 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 PCSK1NQ9UHG2 260 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 AGAP1Q9UPQ3 857 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 RPS6KL1Q9Y6S9 549 aa11.08□□□□□ -0.63
TOP3A-209ENST00000580095 ATXN2Q99700 1313 aaKnown RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TMEM191CA6NGB0 347 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TMEM191BP0C7N4 346 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 POTEJP0CG39 1038 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 PECAM1P16284 738 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 RFC1P35251 1148 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 MAGEA4P43358 317 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 LAMTOR4Q0VGL1 99 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TAF5Q15542 800 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 EEF1DP3Q658K8 133 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 MFSD5Q6N075 450 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 DENND1BQ6P3S1 775 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 PIGWQ7Z7B1 504 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 PHF13Q86YI8 300 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 KATNAL2Q8IYT4 538 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 GRK7Q8WTQ7 553 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 SLITRK1Q96PX8 696 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 LOXHD1Q8IVV2 1947 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 C19orf81C9J6K1 198 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 H0YCG3 227 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 SGK1O00141 431 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 PSTPIP1O43586 416 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 LIASO43766 372 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 MSCO60682 206 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 RASSF9O75901 435 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 ASS1P00966 412 aaKnown RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 CD48P09326 243 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 KLRC2P26717 231 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 CLCN3P51790 818 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 OAZ1P54368 228 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TRPC3Q13507 836 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 HIBCHQ6NVY1 386 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 CYB5D1Q6P9G0 228 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TBC1D1Q86TI0 1168 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-209ENST00000580095 FUKQ8N0W3 1084 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 C4orf33Q8N1A6 199 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 ANKS4BQ8N8V4 417 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 CCDC89Q8N998 374 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 EXD1Q8NHP7 514 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 JOSD2Q8TAC2 188 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms