RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	ARRDC1-AS1	Q9H2J1	176 aa		10.45	□□□□□ -0.74
MSI2-208	ENST00000579466	SMOC1	Q9H4F8	434 aa		10.45	□□□□□ -0.74
MSI2-208	ENST00000579466	C17orf75	Q9HAS0	396 aa		10.45	□□□□□ -0.74
MSI2-208	ENST00000579466	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.45	□□□□□ -0.74
MSI2-208	ENST00000579466	STK24	Q9Y6E0	443 aa		10.45	□□□□□ -0.74
MSI2-208	ENST00000579466	TTC26	A0AVF1	554 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	MYBPHL	A2RUH7	354 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	VWA3A	A6NCI4	1184 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466		K7ENM7	598 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	NFIC	P08651	508 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	CCDC192	P0DO97	292 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	ATF6	P18850	670 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	GUCY2C	P25092	1073 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	NMT1	P30419	496 aa	Known RBP	10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	LRPAP1	P30533	357 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	HMGN5	P82970	282 aa	Known RBP	10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	ENOX2	Q16206	610 aa	Known RBP	10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	TAF12	Q16514	161 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	ARHGAP29	Q52LW3	1261 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	DGKK	Q5KSL6	1271 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	JADE1	Q6IE81	842 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	ARMCX5	Q6P1M9	558 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	MAMSTR	Q6ZN01	415 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	RALGPS2	Q86X27	583 aa	Predicted RBP	10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	BPIFB1	Q8TDL5	484 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	PSMG2	Q969U7	264 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	MSANTD3	Q96H12	275 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	SENP8	Q96LD8	212 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	LLPH	Q9BRT6	129 aa	Known RBP	10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	ZHX3	Q9H4I2	956 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	RPF1	Q9H9Y2	349 aa	Known RBP	10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	RXFP3	Q9NSD7	469 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	MAFF	Q9ULX9	164 aa		10.44	□□□□□ -0.74
MSI2-208	ENST00000579466	MYO16	Q9Y6X6	1858 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	CACNA1G	O43497	2377 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	XPOT	O43592	962 aa	Known RBP	10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	LRP3	O75074	770 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	NEFL	P07196	543 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	PLA2G4B	P0C869	781 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	TYMP	P19971	482 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	U2AF2	P26368	475 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	CNR2	P34972	360 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	AARS	P49588	968 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	CCIN	Q13939	588 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	VEPH1	Q14D04	833 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	TRIM68	Q6AZZ1	485 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	C1orf228	Q6PIY5	440 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	ITIH5	Q86UX2	942 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	REEP2	Q9BRK0	252 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	MSTO1	Q9BUK6	570 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	TIPIN	Q9BVW5	301 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	TASP1	Q9H6P5	420 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	PLEKHA5	Q9HAU0	1116 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	ABI2	Q9NYB9	513 aa	Predicted RBP	10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	DAXX	Q9UER7	740 aa	Predicted RBP	10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	CEP295	Q9C0D2	2601 aa		10.43	□□□□□ -0.74
MSI2-208	ENST00000579466	TISP43	B9A030	160 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	LAD1	O00515	517 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	RPP40	O75818	363 aa	Known RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	FAM13A	O94988	1023 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	PAPSS2	O95340	614 aa	Predicted RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	KRT18	P05783	430 aa	Known RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	CYP3A5	P20815	502 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	MCM2	P49736	904 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	SLC12A3	P55017	1021 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	NCKAP1L	P55160	1127 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	LILRA4	P59901	499 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	MYBPC2	Q14324	1141 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	ZBTB6	Q15916	424 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	ITPRIPL2	Q3MIP1	535 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	C9orf57	Q5W0N0	161 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	NAIF1	Q69YI7	327 aa	Predicted RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	TCEAL6	Q6IPX3	200 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	KBTBD6	Q86V97	674 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	WDR5B	Q86VZ2	330 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	GPBP1	Q86WP2	473 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	MYCT1	Q8N699	235 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	MAB21L3	Q8N8X9	362 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	SYT2	Q8N9I0	419 aa	Predicted RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	RASSF8	Q8NHQ8	419 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	TCEAL3	Q969E4	200 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	HHIP	Q96QV1	700 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	PYM1	Q9BRP8	204 aa	Known RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	NTPCR	Q9BSD7	190 aa	Known RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	OXCT2	Q9BYC2	517 aa	Predicted RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	EBF3	Q9H4W6	596 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	LARS	Q9P2J5	1176 aa	Known RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	RALY	Q9UKM9	306 aa	Known RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	SLC8A2	Q9UPR5	921 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	CCL26	Q9Y258	94 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	ASB3	Q9Y575	518 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	KIAA1549L	Q6ZVL6	1849 aa		10.42	□□□□□ -0.74
MSI2-208	ENST00000579466	CHD6	Q8TD26	2715 aa		10.41	□□□□□ -0.74
MSI2-208	ENST00000579466	ZFHX4	Q86UP3	3567 aa		10.41	□□□□□ -0.74
MSI2-208	ENST00000579466	CYB561D2	O14569	222 aa		10.41	□□□□□ -0.74
MSI2-208	ENST00000579466	OGT	O15294	1046 aa		10.41	□□□□□ -0.74
MSI2-208	ENST00000579466	FAM189A1	O60320	539 aa		10.41	□□□□□ -0.74
MSI2-208	ENST00000579466	RNF40	O75150	1001 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms