RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 BECN1Q14457 450 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 SCARA3Q6AZY7 606 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 ASTLQ6HA08 431 aaPredicted RBP24.75■■□□□ 1.55
VAPA-205ENST00000578314 POTEHQ6S545 545 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 PDZD4Q76G19 769 aaPredicted RBP24.75■■□□□ 1.55
VAPA-205ENST00000578314 NELFCDQ8IXH7 590 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 MCRS1Q96EZ8 462 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 MTMR12Q9C0I1 747 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 MFSD1Q9H3U5 465 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 CGNQ9P2M7 1197 aaKnown RBP24.75■■□□□ 1.55
VAPA-205ENST00000578314 SIX4Q9UIU6 781 aa24.75■■□□□ 1.55
VAPA-205ENST00000578314 A0A1W2PQ27 194 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 A0A1W2PQ64 194 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 A0A1W2PQD8 194 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 TMEM191BP0C7N4 346 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 CEBPBP17676 345 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 CCR2P41597 374 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 SMARCB1Q12824 385 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 PSMD2Q13200 908 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 KNOP1Q1ED39 458 aaKnown RBP24.74■■□□□ 1.55
VAPA-205ENST00000578314 HS2ST1Q7LGA3 356 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 C12orf56Q8IXR9 622 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 HS6ST3Q8IZP7 471 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 SIX5Q8N196 739 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 TCEAL4Q96EI5 215 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 FAM84AQ96KN4 292 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 GDAP2Q9NXN4 497 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 SLC27A5Q9Y2P5 690 aa24.74■■□□□ 1.55
VAPA-205ENST00000578314 PTPRJQ12913 1337 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 CLIC2O15247 247 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 ALDH1A3P47895 512 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 NDUFA8P51970 172 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 EPHB3P54753 998 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 STK4Q13043 487 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 SNRNP35Q16560 246 aaKnown RBP24.73■■□□□ 1.55
VAPA-205ENST00000578314 DUOXA2Q1HG44 320 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 SLC39A12Q504Y0 691 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 TMEM105Q8N8V8 129 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 XXYLT1Q8NBI6 393 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 OR5B17Q8NGF7 314 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 ANKRD36BP1Q96IX9 119 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 PHOX2BQ99453 314 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 LRRC3Q9BY71 257 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 DNAJC25Q9H1X3 360 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 SCN1AP35498 2009 aa24.73■■□□□ 1.55
VAPA-205ENST00000578314 KRBA1A5PL33 1030 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 MOSPD3O75425 235 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 ECI2O75521 394 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 KRT19P08727 400 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 SYKP43405 635 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 GPC5P78333 572 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 KMT5BQ4FZB7 885 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 LMBRD2Q68DH5 695 aaPredicted RBP24.72■■□□□ 1.55
VAPA-205ENST00000578314 CWF19L1Q69YN2 538 aaKnown RBP24.72■■□□□ 1.55
VAPA-205ENST00000578314 LRRTM3Q86VH5 581 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 WDR49Q8IV35 697 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 PDCL2Q8N4E4 241 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 RDH13Q8NBN7 331 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 GPR152Q8TDT2 470 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 C2orf15Q8WU43 125 aaKnown RBP24.72■■□□□ 1.55
VAPA-205ENST00000578314 ASAH2Q9NR71 780 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 L1RE1Q9UN81 338 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 ASB3Q9Y575 518 aa24.72■■□□□ 1.55
VAPA-205ENST00000578314 NRG2O14511 850 aaPredicted RBP24.71■■□□□ 1.55
VAPA-205ENST00000578314 HUS1O60921 280 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 TNNC2P02585 160 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 TUFMP49411 452 aaKnown RBP24.71■■□□□ 1.55
VAPA-205ENST00000578314 CYP2J2P51589 502 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 PSMD6Q15008 389 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 DCP1BQ8IZD4 617 aaKnown RBP24.71■■□□□ 1.55
VAPA-205ENST00000578314 TMEM86AQ8N2M4 240 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 TTC9BQ8N6N2 239 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 FLCNQ8NFG4 579 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 SPATA18Q8TC71 538 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 EXOC1Q9NV70 894 aa24.71■■□□□ 1.55
VAPA-205ENST00000578314 GALR2O43603 387 aaPredicted RBP24.7■■□□□ 1.54
VAPA-205ENST00000578314 AOC1P19801 751 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 CYP24A1Q07973 514 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 BFSP1Q12934 665 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 TMC8Q8IU68 726 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 TOP6BLQ8N6T0 577 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 KIAA0895Q8NCT3 520 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 GOLGA5Q8TBA6 731 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 TMEM174Q8WUU8 243 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 KXD1Q9BQD3 176 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 ACBD6Q9BR61 282 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 IRF2BPLQ9H1B7 796 aa24.7■■□□□ 1.54
VAPA-205ENST00000578314 PRPF40AO75400 957 aaKnown RBP24.69■■□□□ 1.54
VAPA-205ENST00000578314 MYL4P12829 197 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 MYO1EQ12965 1108 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 FAM78AQ5JUQ0 283 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 TANGO2Q6ICL3 276 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 DPH6Q7L8W6 267 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 LIMS2Q7Z4I7 341 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 DNAJB7Q7Z6W7 309 aaPredicted RBP24.69■■□□□ 1.54
VAPA-205ENST00000578314 SPPL2BQ8TCT7 592 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 PSMG2Q969U7 264 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 ELSPBP1Q96BH3 223 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 CA14Q9ULX7 337 aa24.69■■□□□ 1.54
VAPA-205ENST00000578314 R3HCC1Q9Y3T6 440 aaKnown RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms