RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 NTHL1P78549 312 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 ROR1Q01973 937 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 CYP24A1Q07973 514 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 MYBPC2Q14324 1141 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 ANGPT1Q15389 498 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 SURF1Q15526 300 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 NFIL3Q16649 462 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 CTXN3Q4LDR2 81 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
CCDC57-211ENST00000578187 TPGS2Q68CL5 300 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 PHLDB3Q6NSJ2 640 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 NOC3LQ8WTT2 800 aaKnown RBP13.78□□□□□ -0.2
CCDC57-211ENST00000578187 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
CCDC57-211ENST00000578187 SMARCE1Q969G3 411 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 OXCT2Q9BYC2 517 aaPredicted RBP13.78□□□□□ -0.2
CCDC57-211ENST00000578187 CYP4F11Q9HBI6 524 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 DPP3Q9NY33 737 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 GDE1Q9NZC3 331 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 PTPRJQ12913 1337 aa13.78□□□□□ -0.2
CCDC57-211ENST00000578187 KRBA1A5PL33 1030 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 ZNF197O14709 1029 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 PI15O43692 258 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 EXOC3O60645 756 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 PRPF40AO75400 957 aaKnown RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 NR3C1P04150 777 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 ATF2P15336 505 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 LILRA4P59901 499 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 TFAMQ00059 246 aaKnown RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 PSMD6Q15008 389 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 ZCWPW2Q504Y3 356 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 IQCEQ6IPM2 695 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 PARM1Q6UWI2 310 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 USP37Q86T82 979 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 SMYD4Q8IYR2 804 aaPredicted RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 ITFG1Q8TB96 612 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 CACTINQ8WUQ7 758 aaKnown RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 ERCC4Q92889 916 aaPredicted RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 FGF14Q92915 247 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 GTPBP4Q9BZE4 634 aaKnown RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 INTS13Q9NVM9 706 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 HCFC1R1Q9NWW0 138 aa13.77□□□□□ -0.21
CCDC57-211ENST00000578187 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.21
CCDC57-211ENST00000578187 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 WDR27A2RRH5 827 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 SPTLC1O15269 473 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 TBC1D4O60343 1298 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 ABLIM3O94929 683 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 RHOP08100 348 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 CPB1P15086 417 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 PRKCQQ04759 706 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 CYP4A22Q5TCH4 519 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 RSPO2Q6UXX9 243 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 PDZD4Q76G19 769 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 WDR49Q8IV35 697 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 TCEAL8Q8IYN2 117 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 FAM84AQ96KN4 292 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 ZNF560Q96MR9 790 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 MTMR12Q9C0I1 747 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 GZF1Q9H116 711 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 AVENQ9NQS1 362 aaPredicted RBP13.76□□□□□ -0.21
CCDC57-211ENST00000578187 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 MAN1B1Q9UKM7 699 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 ITGA11Q9UKX5 1188 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 MAPK8IP1Q9UQF2 711 aa13.76□□□□□ -0.21
CCDC57-211ENST00000578187 ZDBF2Q9HCK1 2354 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 USP34Q70CQ2 3546 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 ITGB3P05106 788 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 TMEM191BP0C7N4 346 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 TYMPP19971 482 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 POLR2BP30876 1174 aaKnown RBP13.75□□□□□ -0.21
CCDC57-211ENST00000578187 PNPLA4P41247 253 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 PRCPP42785 496 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 TAF6P49848 677 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 GPC5P78333 572 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 PLD1Q13393 1074 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 DSTYKQ6XUX3 929 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 FRMD5Q7Z6J6 570 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 LRRC52Q8N7C0 313 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 LEMD2Q8NC56 503 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 PJA1Q8NG27 643 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 OR5B17Q8NGF7 314 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 ING5Q8WYH8 240 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 BORCS6Q96GS4 357 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 ANKRD36BP1Q96IX9 119 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 ZNF512Q96ME7 567 aaPredicted RBP13.75□□□□□ -0.21
CCDC57-211ENST00000578187 GBP4Q96PP9 640 aa13.75□□□□□ -0.21
CCDC57-211ENST00000578187 CGRRF1Q99675 332 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms