RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 DNAJB7Q7Z6W7 309 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 DCP1BQ8IZD4 617 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 ZBTB45Q96K62 511 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 MKNK1Q9BUB5 465 aa12.18□□□□□ -0.46
SMARCE1-214ENST00000578112 LACTBL1A8MY62 500 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 IL18RAPO95256 599 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 TCF3P15923 654 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 VIPR2P41587 438 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 LILRA4P59901 499 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 GTF2BQ00403 316 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 CCINQ13939 588 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 POSTNQ15063 836 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 FBXO43Q4G163 708 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 KCNK18Q7Z418 384 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 ARID3BQ8IVW6 561 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 SENP8Q96LD8 212 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 ZNF560Q96MR9 790 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 SLITRK6Q9H5Y7 841 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 PARVGQ9HBI0 331 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 ABCB6Q9NP58 842 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 SEMA4GQ9NTN9 838 aa12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 UXTQ9UBK9 157 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-214ENST00000578112 A0A1W2PRU2 124 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 DUSP4Q13115 394 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 TMEM132DQ14C87 1099 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 KARSQ15046 597 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 PDGFRLQ15198 375 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 ENOX2Q16206 610 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 C9orf57Q5W0N0 161 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 GAB3Q8WWW8 586 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 GREB1Q4ZG55 1949 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 CACNA1IQ9P0X4 2223 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 CACNA1AO00555 2505 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 TRDMT1O14717 391 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 HNRNPDLO14979 420 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 FAM13AO94988 1023 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 HARSP12081 509 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 LONP1P36776 959 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 TAF6P49848 677 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 PDE6CP51160 858 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 SV2CQ496J9 727 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 GPR158Q5T848 1215 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 CACNA2D4Q7Z3S7 1137 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 ST13P5Q8NFI4 369 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 ZC3H10Q96K80 434 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 OTOGLQ3ZCN5 2332 aa12.16□□□□□ -0.46
SMARCE1-214ENST00000578112 HAPLN1P10915 354 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 GABRR2P28476 465 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 RABEP1Q15276 862 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 NFE2Q16621 373 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 GAREM2Q75VX8 874 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 RSPRY1Q96DX4 576 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 MSTO1Q9BUK6 570 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 DENND4CQ5VZ89 1909 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 ANK1P16157 1881 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 K7ENM7 598 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 TRAK2O60296 914 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 DRD1P21728 446 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 FNTBP49356 437 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 SPEM2Q0P670 501 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 GRSF1Q12849 480 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 ALCAMQ13740 583 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 TMEM196Q5HYL7 178 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 PRR23BQ6ZRT6 265 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 TMEM86AQ8N2M4 240 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 TRMT2BQ96GJ1 504 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 TMEM206Q9H813 350 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 IL21Q9HBE4 155 aa12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 MORC2Q9Y6X9 1032 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-214ENST00000578112 GVINP1Q7Z2Y8 2422 aa12.15□□□□□ -0.47
SMARCE1-214ENST00000578112 NCANO14594 1321 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 PP2D1A8MPX8 630 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 HRO43593 1189 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 TBCAO75347 108 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 CSH1P0DML2 217 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 CSH2P0DML3 217 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 RPL10AP62906 217 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 SHC2P98077 582 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 GAS6Q14393 721 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 NBR1Q14596 966 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 ARSHQ5FYA8 562 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 CEP68Q76N32 757 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 TMEM209Q96SK2 561 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 EXOC7Q9UPT5 735 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 KIAA0391O15091 583 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 DTNBO60941 627 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 LDHAP00338 332 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 UBA7P41226 1012 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 RAP1GAPP47736 663 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 CACNB1Q02641 598 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 JADE1Q6IE81 842 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 BRAPQ7Z569 592 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 GPBP1Q86WP2 473 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 CMTM8Q8IZV2 173 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms