RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 NACC1Q96RE7 527 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 GAD1Q99259 594 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 HSD17B14Q9BPX1 270 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 CORO1BQ9BR76 489 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 TTC12Q9H892 705 aaPredicted RBP6.91□□□□□ -1.3
NUP88-212ENST00000576708 RSAD1Q9HA92 442 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 GPRC5CQ9NQ84 441 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 FAM86C1Q9NVL1 165 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 MARCH5Q9NX47 278 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 FAN1Q9Y2M0 1017 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 PRG3Q9Y2Y8 225 aaPredicted RBP6.91□□□□□ -1.3
NUP88-212ENST00000576708 IPPQ9Y573 584 aa6.91□□□□□ -1.3
NUP88-212ENST00000576708 TRIOO75962 3097 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 FSD2A1L4K1 749 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ARL5CA6NH57 179 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 F8W735 103 aaPredicted RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 INO80B-WBP1J3KQ70 363 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ASAP2O43150 1006 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 RECKO95980 971 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ALDH2P05091 517 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 CNPP09543 421 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 SPATA31D3P0C874 917 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ITGA4P13612 1032 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 BMP6P22004 513 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 NME2P22392 152 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 GLRA2P23416 452 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 AKAP5P24588 427 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 KLRC2P26717 231 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ARL2P36404 184 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 MLH1P40692 756 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 MTHFRP42898 656 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 OR1G1P47890 313 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 SCNN1GP51170 649 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 NEK4P51957 841 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ANAPC15P60006 121 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 PTENP60484 403 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 MBTD1Q05BQ5 628 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 TCF15Q12870 199 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ANKRD1Q15327 319 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 SPATA31D4Q6ZUB0 917 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 SV2BQ7L1I2 683 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 CABP7Q86V35 215 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 SUGP1Q8IWZ8 645 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 COLGALT2Q8IYK4 626 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 GRIN3AQ8TCU5 1115 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 TCP11Q8WWU5 503 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 WASF1Q92558 559 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 B3GALT6Q96L58 329 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 FAM193BQ96PV7 902 aaPredicted RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 MTMR9Q96QG7 549 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 NAP1L4Q99733 375 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 POLR3FQ9H1D9 316 aaPredicted RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 CXCL16Q9H2A7 254 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 NXF3Q9H4D5 531 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 AKTIPQ9H8T0 292 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 POLD4Q9HCU8 107 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 CACNG4Q9UBN1 327 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
NUP88-212ENST00000576708 PCDHA12Q9UN75 941 aa6.9□□□□□ -1.3
NUP88-212ENST00000576708 ARID2Q68CP9 1835 aa6.9□□□□□ -1.31
NUP88-212ENST00000576708 NEMFO60524 1076 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 USO1O60763 962 aaKnown RBP6.89□□□□□ -1.31
NUP88-212ENST00000576708 MED24O75448 989 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ERLIN2O94905 339 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 LYPLA2O95372 231 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 NPTXRO95502 500 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ITGB2P05107 769 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ARF4P18085 180 aaPredicted RBP6.89□□□□□ -1.31
NUP88-212ENST00000576708 ARNTP27540 789 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 NOS3P29474 1203 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 AVPR2P30518 371 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 MCM7P33993 719 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 RARRES1P49788 294 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 CLCN4P51793 760 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ITIH3Q06033 890 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 BMS1Q14692 1282 aaKnown RBP6.89□□□□□ -1.31
NUP88-212ENST00000576708 ZNF174Q15697 407 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 PLA2G4EQ3MJ16 856 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ATAT1Q5SQI0 421 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 XP32Q5T750 250 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 KIAA1841Q6NSI8 718 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 CCDC83Q8IWF9 413 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 EXOC8Q8IYI6 725 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 TDRD5Q8NAT2 981 aaKnown RBP6.89□□□□□ -1.31
NUP88-212ENST00000576708 GSTCDQ8NEC7 633 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ST13P5Q8NFI4 369 aaPredicted RBP6.89□□□□□ -1.31
NUP88-212ENST00000576708 WFDC12Q8WWY7 111 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 RIPOR3Q96MK2 946 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 NECTIN4Q96NY8 510 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 TMEM175Q9BSA9 504 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 HERC2P3Q9BVR0 1158 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 CSRNP2Q9H175 543 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 CCDC86Q9H6F5 360 aaKnown RBP6.89□□□□□ -1.31
NUP88-212ENST00000576708 BRMS1Q9HCU9 246 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 ANKEF1Q9NU02 776 aa6.89□□□□□ -1.31
NUP88-212ENST00000576708 NR2E1Q9Y466 385 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms