RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 FAM163BP0C2L3 166 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 CD58P19256 250 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 TRIM21P19474 475 aaKnown RBP9.13□□□□□ -0.95
PRPF8-213ENST00000576407 TYMPP19971 482 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 RFX1P22670 979 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 MFAP3P55082 362 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 POLR2FP61218 127 aaKnown RBP9.13□□□□□ -0.95
PRPF8-213ENST00000576407 GABPB1Q06547 395 aaPredicted RBP9.13□□□□□ -0.95
PRPF8-213ENST00000576407 ARHGAP44Q17R89 818 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 USP41Q3LFD5 358 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 RTP2Q5QGT7 225 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 SPECC1LQ69YQ0 1117 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 ENOSF1Q7L5Y1 443 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 METTL23Q86XA0 190 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 ADGRF2Q8IZF7 708 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 VPS52Q8N1B4 723 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 TMEM86AQ8N2M4 240 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 FBXO22Q8NEZ5 403 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 MYRIPQ8NFW9 859 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 SPPL3Q8TCT6 385 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 KBTBD7Q8WVZ9 684 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 ARNTL2Q8WYA1 636 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 TTPALQ9BTX7 342 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 HERC2P3Q9BVR0 1158 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 NAA15Q9BXJ9 866 aaKnown RBP9.13□□□□□ -0.95
PRPF8-213ENST00000576407 CHST7Q9NS84 486 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 CISHQ9NSE2 258 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 STK39Q9UEW8 545 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
PRPF8-213ENST00000576407 FBXL5Q9UKA1 691 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 DSEQ9UL01 958 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 LZTS1Q9Y250 596 aa9.13□□□□□ -0.95
PRPF8-213ENST00000576407 CCDC66A2RUB6 948 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 EPOPA6NHQ4 379 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 H3BNC9 293 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 GABRDO14764 452 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 GRM6O15303 877 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 HCRTO43612 131 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 OAZ2O95190 189 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 ACO1P21399 889 aaKnown RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 WARSP23381 471 aaKnown RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 DNAJB1P25685 340 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 LMO2P25791 158 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 GNL1P36915 607 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 LHX1P48742 406 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 GLUD2P49448 558 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 YWHAEP62258 255 aaKnown RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 DSG1Q02413 1049 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 YWHAHQ04917 246 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 UBE3AQ05086 875 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 INCA1Q0VD86 236 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 GPM6BQ13491 265 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 RAPGEF1Q13905 1077 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 MRPL58Q14197 206 aaKnown RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 DRAP1Q14919 205 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 FIGNQ5HY92 759 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 KIAA0319Q5VV43 1072 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 OVOS1Q6IE37 1185 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 KIAA1841Q6NSI8 718 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 PRSS55Q6UWB4 352 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 OSTM1Q86WC4 334 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 UBR7Q8N806 425 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 OR6B3Q8NGW1 331 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 LNX1Q8TBB1 728 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 SPATA18Q8TC71 538 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 WHAMMQ8TF30 809 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 POF1BQ8WVV4 589 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 RIN2Q8WYP3 895 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 SHC3Q92529 594 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 JAKMIP2Q96AA8 810 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 RTP3Q9BQQ7 232 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 NUP58Q9BVL2 599 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 TTYH3Q9C0H2 523 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 ZBP1Q9H171 429 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 SNX25Q9H3E2 840 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 FAM124BQ9H5Z6 455 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 NLRC4Q9NPP4 1024 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 DDX43Q9NXZ2 648 aaKnown RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 CEP72Q9P209 647 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 CHD7Q9P2D1 2997 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 HMGXB4Q9UGU5 601 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 BARX2Q9UMQ3 279 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 DAAM1Q9Y4D1 1078 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 NME7Q9Y5B8 376 aa9.12□□□□□ -0.95
PRPF8-213ENST00000576407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.12□□□□□ -0.95
PRPF8-213ENST00000576407 VWA8A3KMH1 1905 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 A0A1W2PQJ5 194 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 A8MXQ7 604 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 F8VZ95 297 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 RNF225M0QZC1 329 aaPredicted RBP9.11□□□□□ -0.95
PRPF8-213ENST00000576407 FOXN3O00409 490 aaPredicted RBP9.11□□□□□ -0.95
PRPF8-213ENST00000576407 SOX1O00570 391 aaPredicted RBP9.11□□□□□ -0.95
PRPF8-213ENST00000576407 C2CD2LO14523 706 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CILPO75339 1184 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 GYPCP04921 128 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 URODP06132 367 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 PDGFRBP09619 1106 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms