RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 MAPK13O15264 365 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 AKAP3O75969 853 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 CLSTN1O94985 981 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 CST3P01034 146 aaPredicted RBP22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 ALADP13716 330 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 NTHL1P78549 312 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 SLC39A12Q504Y0 691 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 FAM186BQ8IYM0 893 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 ADGRF2Q8IZF7 708 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 PLCD3Q8N3E9 789 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 TOP6BLQ8N6T0 577 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 TMC2Q8TDI7 906 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 TSG101Q99816 390 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 ZCWPW1Q9H0M4 648 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 EPHX3Q9H6B9 360 aa22.25■■□□□ 1.15
HCFC1R1-208ENST00000575214 MTMR11A4FU01 709 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 KRT13P13646 458 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 PSMC2P35998 433 aaKnown RBP22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 DLG4P78352 724 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 TWF1Q12792 350 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 STIM1Q13586 685 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 TDRD10Q5VZ19 366 aaKnown RBP22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 ZDHHC14Q8IZN3 488 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 ADSSL1Q8N142 457 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 ELMOD1Q8N336 334 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 ATAD1Q8NBU5 361 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 MMS19Q96T76 1030 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 HCFC1R1Q9NWW0 138 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 DDX43Q9NXZ2 648 aaKnown RBP22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 YIPF1Q9Y548 306 aa22.24■■□□□ 1.15
HCFC1R1-208ENST00000575214 DENND4AQ7Z401 1863 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 VNN2O95498 520 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 FSHRP23945 695 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 VAMP7P51809 220 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 CLDN10P78369 228 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 MYL7Q01449 175 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 TSPY1Q01534 308 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 DUSP4Q13115 394 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 SOWAHAQ2M3V2 549 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 PABPC1LQ4VXU2 614 aaKnown RBP22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 CENPPQ6IPU0 288 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 INTS8Q75QN2 995 aaKnown RBP22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 DCP1BQ8IZD4 617 aaKnown RBP22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 SPATA18Q8TC71 538 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 EEF2KMTQ96G04 330 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 DNMT3BQ9UBC3 853 aaKnown RBP22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 LIMD1Q9UGP4 676 aa22.23■■□□□ 1.15
HCFC1R1-208ENST00000575214 BIN1O00499 593 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 PSMA7O14818 248 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 CETN3O15182 167 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 N4BP1O75113 896 aaKnown RBP22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 CDR1P51861 262 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 MYL6P60660 151 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 TNNC1P63316 161 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 CAMK4Q16566 473 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 DPH6Q7L8W6 267 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 OSTM1Q86WC4 334 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 SYAP1Q96A49 352 aaPredicted RBP22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 MYADMQ96S97 322 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 CRISPLD1Q9H336 500 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 SLC27A5Q9Y2P5 690 aa22.22■■□□□ 1.15
HCFC1R1-208ENST00000575214 C4BPAP04003 597 aaKnown RBP22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 RHOP08100 348 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 EPB41P11171 864 aaKnown RBP22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 PTPN2P17706 415 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 ACAT1P24752 427 aaKnown RBP22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 ATICP31939 592 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 PPP1R2P41236 205 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 LHX1P48742 406 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 SMARCB1Q12824 385 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 PLD1Q13393 1074 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 NCOA4Q13772 614 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 WDR72Q3MJ13 1102 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 IQCEQ6IPM2 695 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 CLEC17AQ6ZS10 378 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 LRRTM3Q86VH5 581 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 TTC9BQ8N6N2 239 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 ACBD6Q9BR61 282 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 CORO1BQ9BR76 489 aa22.21■■□□□ 1.15
HCFC1R1-208ENST00000575214 TRIM49BA6NDI0 452 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 IKBKBO14920 756 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 ASGR2P07307 311 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 TRIM49P0CI25 452 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 TRIM49CP0CI26 452 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 PCSK1P29120 753 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 ALDH1A3P47895 512 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 PMS1P54277 932 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 LRRC63Q05C16 580 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 MORC3Q14149 939 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZNF699Q32M78 642 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 ANKRD40Q6AI12 368 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 KLHL10Q6JEL2 608 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 C2orf15Q8WU43 125 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 ZNF512Q96ME7 567 aaPredicted RBP22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 GBP4Q96PP9 640 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 SEPT5Q99719 369 aaPredicted RBP22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 MKNK1Q9BUB5 465 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 XYLT2Q9H1B5 865 aa22.2■■□□□ 1.14
HCFC1R1-208ENST00000575214 ABI2Q9NYB9 513 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms