RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 SPATA18Q8TC71 538 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 TATDN2Q93075 761 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 KLHL5Q96PQ7 755 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 OXCT2Q9BYC2 517 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 INTS2Q9H0H0 1204 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 IGFLR1Q9H665 355 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 APOBEC3GQ9HC16 384 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 DDX43Q9NXZ2 648 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 FNIP2Q9P278 1114 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 MTRRQ9UBK8 725 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 BACE2Q9Y5Z0 518 aa15.54■□□□□ 0.08
NPLOC4-218ENST00000574964 OR6C75A6NL08 312 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 PER2O15055 1255 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 TEX28O15482 410 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 LILRB3O75022 631 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 CNPP09543 421 aaKnown RBP15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 FAM163BP0C2L3 166 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 OR1D2P34982 312 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 NRIP1P48552 1158 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 NDUFV1P49821 464 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 CDH8P55286 799 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 TSPY1Q01534 308 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 UBXN1Q04323 297 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 ADGRD2Q7Z7M1 963 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 PPFIBP1Q86W92 1011 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 DNAI2Q9GZS0 605 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 SMYD3Q9H7B4 428 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 CYP3A43Q9HB55 503 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 RXFP1Q9HBX9 757 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 FBXL5Q9UKA1 691 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 CDY1Q9Y6F8 540 aa15.53■□□□□ 0.08
NPLOC4-218ENST00000574964 LRRC10BA6NIK2 292 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 LGALS16A8MUM7 142 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 A8MXQ7 604 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 TACC1O75410 805 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 PDGFRBP09619 1106 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 WEE2P0C1S8 567 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 CPB1P15086 417 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 CD58P19256 250 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 TRIM21P19474 475 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 SLC9A1P19634 815 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 WARSP23381 471 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 TBXAS1P24557 533 aaPredicted RBP15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 PCSK1P29120 753 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 RAP1GAPP47736 663 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 YWHAEP62258 255 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 PALB2Q86YC2 1186 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 PPM1KQ8N3J5 372 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 PPM1EQ8WY54 764 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 FAXDC2Q96IV6 333 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 CDCA3Q99618 268 aaPredicted RBP15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 CLSTN3Q9BQT9 956 aa15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 MRPL45Q9BRJ2 306 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-218ENST00000574964 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 CLASP2O75122 1294 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 ACAT1P24752 427 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 PON1P27169 355 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 ASPAP45381 313 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 FANCCQ00597 558 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 CUL2Q13617 745 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 CCDC85BQ15834 202 aaPredicted RBP15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 DUSP6Q16828 381 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 TRIM65Q6PJ69 517 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 EP400NLQ6ZTU2 488 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 RRAGAQ7L523 313 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 OSTM1Q86WC4 334 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 DCP1BQ8IZD4 617 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 TTC39CQ8N584 583 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 LMO3Q8TAP4 145 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 KBTBD7Q8WVZ9 684 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 FAM81BQ96LP2 452 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 ACBD6Q9BR61 282 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 LSM14BQ9BX40 385 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 BCO2Q9BYV7 579 aa15.51■□□□□ 0.07
NPLOC4-218ENST00000574964 CHD9Q3L8U1 2897 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 BRWD1Q9NSI6 2320 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 GABRDO14764 452 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 GLUD1P00367 558 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 TPM3P06753 285 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 SRGAP2BP0DMP2 458 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 ELF1P32519 619 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 UBASH3AP57075 661 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 ROR1Q01973 937 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 SKIV2LQ15477 1246 aaKnown RBP15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 SLC8B1Q6J4K2 584 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 LLGL2Q6P1M3 1020 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 ELMSAN1Q6PJG2 1045 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 RSPO2Q6UXX9 243 aaPredicted RBP15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 LIMS2Q7Z4I7 341 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 SYT15Q9BQS2 421 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 SDCBP2Q9H190 292 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 UBE2TQ9NPD8 197 aaPredicted RBP15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 CDH9Q9ULB4 789 aa15.5■□□□□ 0.07
NPLOC4-218ENST00000574964 STXBP5LQ9Y2K9 1186 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms