RNA–Protein interactions for RNA: ENST00000574933.1

CCDC40-213, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-213ENST00000574933 ADGRF2Q8IZF7 708 aa19.47■□□□□ 0.71
CCDC40-213ENST00000574933 ELMO3Q96BJ8 720 aa19.47■□□□□ 0.71
CCDC40-213ENST00000574933 FAM81BQ96LP2 452 aa19.47■□□□□ 0.71
CCDC40-213ENST00000574933 NAP1L5Q96NT1 182 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-213ENST00000574933 SIX2Q9NPC8 291 aa19.47■□□□□ 0.71
CCDC40-213ENST00000574933 PLCB1Q9NQ66 1216 aa19.47■□□□□ 0.71
CCDC40-213ENST00000574933 SIK3Q9Y2K2 1263 aa19.47■□□□□ 0.71
CCDC40-213ENST00000574933 TIMM13Q9Y5L4 95 aaPredicted RBP19.47■□□□□ 0.71
CCDC40-213ENST00000574933 PES1O00541 588 aaKnown RBP19.46■□□□□ 0.71
CCDC40-213ENST00000574933 SERPINC1P01008 464 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 TBXAS1P24557 533 aaPredicted RBP19.46■□□□□ 0.71
CCDC40-213ENST00000574933 INCA1Q0VD86 236 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 ADGRE1Q14246 886 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 PLPP4Q5VZY2 271 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 SLC8B1Q6J4K2 584 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 PRSS55Q6UWB4 352 aaPredicted RBP19.46■□□□□ 0.71
CCDC40-213ENST00000574933 OSTM1Q86WC4 334 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 TTC39CQ8N584 583 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 UBR7Q8N806 425 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 AUTS2Q8WXX7 1259 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 JAKMIP2Q96AA8 810 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 MMS19Q96T76 1030 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 RTP3Q9BQQ7 232 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 CLSTN3Q9BQT9 956 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 SDCBP2Q9H190 292 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 SMYD3Q9H7B4 428 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 MTMR10Q9NXD2 777 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 MTCH2Q9Y6C9 303 aa19.46■□□□□ 0.71
CCDC40-213ENST00000574933 CDH23Q9H251 3354 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 A0A1W2PQC6 194 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 OR6C75A6NL08 312 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 HIDE1A8MVS5 230 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 TEX33O43247 280 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 UBXN1Q04323 297 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 CUL2Q13617 745 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 PHLDB3Q6NSJ2 640 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 Q7L0L9 218 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 DEFB123Q8N688 67 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 KLHL5Q96PQ7 755 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 ACBD6Q9BR61 282 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 MRPL45Q9BRJ2 306 aaKnown RBP19.45■□□□□ 0.7
CCDC40-213ENST00000574933 APEX2Q9UBZ4 518 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 FBXL5Q9UKA1 691 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 DAAM1Q9Y4D1 1078 aa19.45■□□□□ 0.7
CCDC40-213ENST00000574933 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 CNPP09543 421 aaKnown RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 NDUFV1P49821 464 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 CDH8P55286 799 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 UBASH3AP57075 661 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 UVSSAQ2YD98 709 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 CTXN3Q4LDR2 81 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 SARM1Q6SZW1 724 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 RSPO2Q6UXX9 243 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 ENOSF1Q7L5Y1 443 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 UNC93AQ86WB7 457 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 ARHGEF19Q8IW93 802 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 THEM5Q8N1Q8 247 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 MICAL1Q8TDZ2 1067 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 FAM161BQ96MY7 647 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 GUCD1Q96NT3 240 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 GAS2L1Q99501 681 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 EMILIN2Q9BXX0 1053 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 NSUN3Q9H649 340 aaKnown RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 DDX43Q9NXZ2 648 aaKnown RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 BARX2Q9UMQ3 279 aaPredicted RBP19.44■□□□□ 0.7
CCDC40-213ENST00000574933 STXBP5LQ9Y2K9 1186 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 NME7Q9Y5B8 376 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 PCDHGC5Q9Y5F6 944 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 SZT2Q5T011 3432 aa19.44■□□□□ 0.7
CCDC40-213ENST00000574933 C2CD2LO14523 706 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 TEX28O15482 410 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 CILPO75339 1184 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 WEE2P0C1S8 567 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 RFX1P22670 979 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 PCSK1P29120 753 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 GNL1P36915 607 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-213ENST00000574933 PBX1P40424 430 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 YWHAEP62258 255 aaKnown RBP19.43■□□□□ 0.7
CCDC40-213ENST00000574933 LRMPQ12912 555 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 RAB33AQ14088 237 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 SYCP1Q15431 976 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 KLHDC7AQ5VTJ3 777 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 SCARA5Q6ZMJ2 495 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 PPM1KQ8N3J5 372 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 OR10T2Q8NGX3 314 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 KREMEN1Q96MU8 473 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 CDCA3Q99618 268 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-213ENST00000574933 CDX2Q99626 313 aaPredicted RBP19.43■□□□□ 0.7
CCDC40-213ENST00000574933 PKMYT1Q99640 499 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 ARID3AQ99856 593 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 ZCWPW1Q9H0M4 648 aa19.43■□□□□ 0.7
CCDC40-213ENST00000574933 ADAM12O43184 909 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 NOL4O94818 638 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 CLSTN1O94985 981 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 ADH1AP07327 375 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 RPL17P18621 184 aaKnown RBP19.42■□□□□ 0.7
CCDC40-213ENST00000574933 ACO1P21399 889 aaKnown RBP19.42■□□□□ 0.7
CCDC40-213ENST00000574933 RAP1GAPP47736 663 aa19.42■□□□□ 0.7
CCDC40-213ENST00000574933 DUSP6Q16828 381 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms