RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ADRA2BP18089 450 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 TPP2P29144 1249 aaPredicted RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 HOXA13P31271 388 aaPredicted RBP15.18■□□□□ 0.02
SMG6-215ENST00000574501 ARSEP51690 589 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 RAP1GDS1P52306 607 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 KDSRQ06136 332 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 TFDP1Q14186 410 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 KRT72Q14CN4 511 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMG6-215ENST00000574501 TREML1Q86YW5 311 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 ARHGAP24Q8N264 748 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 SHKBP1Q8TBC3 707 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 CPA5Q8WXQ8 436 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 PPP2R3CQ969Q6 453 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 DNPEPQ9ULA0 475 aa15.18■□□□□ 0.02
SMG6-215ENST00000574501 IGKV6D-41A0A0C4DH26 115 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 TBX3O15119 743 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 PFDN1O60925 122 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 KRT10P13645 584 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 VAV1P15498 845 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 BGNP21810 368 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 SSTR1P30872 391 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 ZNF76P36508 570 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 GEMIN4P57678 1058 aaKnown RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 GPX6P59796 221 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 BPIFB4P59827 614 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 AP2B1P63010 937 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 GPATCH4Q5T3I0 446 aaKnown RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 C1orf146Q5VVC0 180 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 RBM12BQ8IXT5 1001 aaKnown RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 TTC17Q96AE7 1141 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 FAM20AQ96MK3 541 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 OLFM3Q96PB7 478 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 ZNF148Q9UQR1 794 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 USTQ9Y2C2 406 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 TBC1D30Q9Y2I9 924 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 MYH11P35749 1972 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 CDK5RAP2Q96SN8 1893 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 ASLP04424 464 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 EEF2P13639 858 aaKnown RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 SLC1A1P43005 524 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 KCNQ4P56696 695 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 TAS2R40P59535 323 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 GAD2Q05329 585 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 OLFML2BQ68BL8 750 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 STXBP4Q6ZWJ1 553 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 MYLK4Q86YV6 388 aaPredicted RBP15.17■□□□□ 0.02
SMG6-215ENST00000574501 ULK2Q8IYT8 1036 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 STKLD1Q8NE28 680 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 HSD17B14Q9BPX1 270 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 HSFX1Q9UBD0 423 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
SMG6-215ENST00000574501 ABCA3Q99758 1704 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 GOLGA8IPA6NC78 632 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 GOLGA8JA6NMD2 632 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 F8W8V4 182 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 PI4K2BG5E9Z4 385 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 GRIN3BO60391 1043 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 COQ9O75208 318 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 CIB2O75838 187 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 FAM163BP0C2L3 166 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 PABPC4LP0CB38 370 aaKnown RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 MXI1P50539 228 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 TBC1D10BQ4KMP7 808 aaPredicted RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 DPY19L2Q6NUT2 758 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 ISLR2Q6UXK2 745 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 NET1Q7Z628 596 aaPredicted RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 TMPRSS6Q8IU80 811 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 WRAP73Q9P2S5 460 aaPredicted RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 SLC7A8Q9UHI5 535 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 SLC24A2Q9UI40 661 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 CHMP2BQ9UQN3 213 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 E5RJQ4 531 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 K7ENM7 598 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 MAGEC1O60732 1142 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 MTMR2Q13614 643 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 NFIXQ14938 502 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 ZFYVE27Q5T4F4 411 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 ACBD5Q5T8D3 534 aaPredicted RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 CLEC4GQ6UXB4 293 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 NME8Q8N427 588 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMG6-215ENST00000574501 DDX1Q92499 740 aaKnown RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 SHC3Q92529 594 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 IWS1Q96ST2 819 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 VPS11Q9H270 941 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 RANBP17Q9H2T7 1088 aaKnown RBP15.16■□□□□ 0.02
SMG6-215ENST00000574501 TMEM165Q9HC07 324 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 IL1RAPL1Q9NZN1 696 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 RABGEF1Q9UJ41 708 aa15.16■□□□□ 0.02
SMG6-215ENST00000574501 ALOX15BO15296 676 aa15.15■□□□□ 0.02
SMG6-215ENST00000574501 BUD23O43709 281 aaKnown RBP15.15■□□□□ 0.02
SMG6-215ENST00000574501 ZNF862O60290 1169 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms