RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SMC6Q96SB8 1091 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 IP6K2Q9UHH9 426 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 AGO2Q9UKV8 859 aaKnown RBP20.14■□□□□ 0.81
SCARF1-206ENST00000573852 NUB1Q9Y5A7 615 aa20.14■□□□□ 0.81
SCARF1-206ENST00000573852 BANF1O75531 89 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 FGFR1P11362 822 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 CA4P22748 312 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 PAX7P23759 505 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 SLC18A1P54219 525 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 WDR72Q3MJ13 1102 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 DRICH1Q6PGQ1 229 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-206ENST00000573852 ATP6V0A1Q93050 837 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 RBM41Q96IZ5 413 aaKnown RBP20.13■□□□□ 0.81
SCARF1-206ENST00000573852 KIAA1683Q9H0B3 1180 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 NKX1-2Q9UD57 310 aaPredicted RBP20.13■□□□□ 0.81
SCARF1-206ENST00000573852 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 PSME4Q14997 1843 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 TMEM191CA6NGB0 347 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 F8VP50 259 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 ALOX15BO15296 676 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 WFS1O76024 890 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 TJP3O95049 919 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 T-ENOLP0DO92 83 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 CDC25CP30307 473 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 RTP1P59025 263 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 PARP6Q2NL67 630 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 QTRT2Q9H974 415 aaKnown RBP20.13■□□□□ 0.81
SCARF1-206ENST00000573852 CYP26B1Q9NR63 512 aa20.13■□□□□ 0.81
SCARF1-206ENST00000573852 SMG5Q9UPR3 1016 aaKnown RBP20.13■□□□□ 0.81
SCARF1-206ENST00000573852 TYROBPO43914 113 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 NOP14P78316 857 aaKnown RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 MAP3K10Q02779 954 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 BAATQ14032 418 aaPredicted RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 MORF4L2Q15014 288 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 ANKRD20A2Q5SQ80 823 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 RNASEH2BQ5TBB1 312 aaKnown RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 ANKRD20A1Q5TYW2 823 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 ANKRD20A3Q5VUR7 823 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 FKBP1CQ5VVH2 108 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 SPOCD1Q6ZMY3 1216 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 VSIG10LQ86VR7 867 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 CCDC60Q8IWA6 550 aaPredicted RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 KCNV2Q8TDN2 545 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 MAK16Q9BXY0 300 aaKnown RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 CNTN6Q9UQ52 1028 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 RIPK3Q9Y572 518 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 KIAA1217Q5T5P2 1943 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 MMP8P22894 467 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 PRKCEQ02156 737 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 OGDHQ02218 1023 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 OASLQ15646 514 aaKnown RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 FAM83AQ86UY5 434 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 LRRC8CQ8TDW0 803 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 C10orf82Q8WW14 230 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 LPAR1Q92633 364 aa20.12■□□□□ 0.81
SCARF1-206ENST00000573852 DRG1Q9Y295 367 aaKnown RBP20.12■□□□□ 0.81
SCARF1-206ENST00000573852 ATP5HO75947 161 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 NR3C2P08235 984 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 KCNA2P16389 499 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 RNASELQ05823 741 aaKnown RBP20.11■□□□□ 0.81
SCARF1-206ENST00000573852 PDIA2Q13087 525 aaKnown RBP20.11■□□□□ 0.81
SCARF1-206ENST00000573852 ANKMY2Q8IV38 441 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 OR5B17Q8NGF7 314 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 ZNF606Q8WXB4 792 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 SLC7A6OSQ96CW6 309 aaPredicted RBP20.11■□□□□ 0.81
SCARF1-206ENST00000573852 WNK4Q96J92 1243 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 TMEM121Q9BTD3 319 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 BATF3Q9NR55 127 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 RBAKQ9NYW8 714 aaPredicted RBP20.11■□□□□ 0.81
SCARF1-206ENST00000573852 STYXL1Q9Y6J8 313 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 GOLGA8SH3BPF8 625 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 GOLGA8MH3BSY2 632 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 CCNG1P51959 295 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 VCPP55072 806 aaKnown RBP20.11■□□□□ 0.81
SCARF1-206ENST00000573852 FAXDC2Q96IV6 333 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 SENP1Q9P0U3 644 aa20.11■□□□□ 0.81
SCARF1-206ENST00000573852 MYH9P35579 1960 aaKnown RBP20.11■□□□□ 0.81
SCARF1-206ENST00000573852 ZBED4O75132 1171 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 RGS20O76081 388 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 CCND2P30279 289 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 GPX6P59796 221 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 GAD2Q05329 585 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 MTERF2Q49AM1 385 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 AGGF1Q8N302 714 aaeCLIP20.1■□□□□ 0.81
SCARF1-206ENST00000573852 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 GPRASP2Q96D09 838 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 MCEEQ96PE7 176 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 hCG_1818297A0A087WSY0 165 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 DCTN3O75935 186 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 IFNB1P01574 187 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 PSAPP07602 524 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 GM2AP17900 193 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 HHATQ5VTY9 493 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 ZNF449Q6P9G9 518 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 CENPUQ71F23 418 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 OTOAQ7RTW8 1153 aa20.1■□□□□ 0.81
SCARF1-206ENST00000573852 TMEM143Q96AN5 459 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms