RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 ARID3AQ99856 593 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 SYT11Q9BT88 431 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.28□□□□□ -0.76
NDE1-208ENST00000573694 APOBEC3GQ9HC16 384 aaKnown RBP10.28□□□□□ -0.76
NDE1-208ENST00000573694 TLR9Q9NR96 1032 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 PAXBP1Q9Y5B6 917 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 IRAK3Q9Y616 596 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 MRPL42Q9Y6G3 142 aaKnown RBP10.28□□□□□ -0.76
NDE1-208ENST00000573694 DUSP10Q9Y6W6 482 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 SCN1AP35498 2009 aa10.28□□□□□ -0.76
NDE1-208ENST00000573694 UQCRHLA0A096LP55 91 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 MACROD2A1Z1Q3 448 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 DDX3XO00571 662 aaKnown RBP eCLIP10.27□□□□□ -0.77
NDE1-208ENST00000573694 GRM6O15303 877 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 ERLIN2O94905 339 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 CALCAP01258 141 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 ITGB1P05556 798 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 UQCRHP07919 91 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 NFICP08651 508 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 MCF2P10911 925 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 CASQ1P31415 396 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 ALDH7A1P49419 539 aaKnown RBP10.27□□□□□ -0.77
NDE1-208ENST00000573694 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
NDE1-208ENST00000573694 ZNF662Q6ZS27 426 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
NDE1-208ENST00000573694 WDR49Q8IV35 697 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 KLHL23Q8NBE8 558 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 MYRIPQ8NFW9 859 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 SHC3Q92529 594 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 ZNF558Q96NG5 402 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 RPF1Q9H9Y2 349 aaKnown RBP10.27□□□□□ -0.77
NDE1-208ENST00000573694 SPG21Q9NZD8 308 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 ADAMTS1Q9UHI8 967 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 CD207Q9UJ71 328 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 SSX2IPQ9Y2D8 614 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 NLRC5Q86WI3 1866 aa10.27□□□□□ -0.77
NDE1-208ENST00000573694 TBKBP1A7MCY6 615 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 FSCN2O14926 492 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 INPPL1O15357 1258 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 PJA2O43164 708 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 KRT86O43790 486 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 FGF18O76093 207 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 MOCS3O95396 460 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 NPTXRO95502 500 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 TUBB4AP04350 444 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 LTBRP36941 435 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 USP8P40818 1118 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 MFAP3P55082 362 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
NDE1-208ENST00000573694 TFAMQ00059 246 aaKnown RBP10.26□□□□□ -0.77
NDE1-208ENST00000573694 HYAL1Q12794 435 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 CAMK1Q14012 370 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 TMEM31Q5JXX7 168 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 GLB1LQ6UWU2 654 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 CATSPER4Q7RTX7 472 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 MRPL10Q7Z7H8 261 aaKnown RBP10.26□□□□□ -0.77
NDE1-208ENST00000573694 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
NDE1-208ENST00000573694 PALB2Q86YC2 1186 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 HACE1Q8IYU2 909 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 COLGALT1Q8NBJ5 622 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 LRRN4CLQ8ND94 238 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 POF1BQ8WVV4 589 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 CASD1Q96PB1 797 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 TSGA10Q9BZW7 698 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 ACP6Q9NPH0 428 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 CLDND1Q9NY35 253 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 DPP7Q9UHL4 492 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 SALL4Q9UJQ4 1053 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 BZW2Q9Y6E2 419 aaKnown RBP10.26□□□□□ -0.77
NDE1-208ENST00000573694 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
NDE1-208ENST00000573694 LACTBL1A8MY62 500 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 PRR33A8MZF0 331 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 CYP26A1O43174 497 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 MGEA5O60502 916 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 ZC3H11AO75152 810 aaKnown RBP eCLIP10.25□□□□□ -0.77
NDE1-208ENST00000573694 PHACTR2O75167 634 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 URI1O94763 535 aaPredicted RBP10.25□□□□□ -0.77
NDE1-208ENST00000573694 CLSTN1O94985 981 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 IL18RAPO95256 599 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 CLTAP09496 248 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 TMEM191BP0C7N4 346 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 CHRNB2P17787 502 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 COL9A1P20849 921 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 ANXA13P27216 316 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 GUCY2FP51841 1108 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 MYL6P60660 151 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 NCOA4Q13772 614 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 SPOUT1Q5T280 376 aaKnown RBP10.25□□□□□ -0.77
NDE1-208ENST00000573694 TAF3Q5VWG9 929 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 JADE1Q6IE81 842 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 ELMSAN1Q6PJG2 1045 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 KCNT2Q6UVM3 1135 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 TRAPPC11Q7Z392 1133 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 SPRED2Q7Z698 418 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 GLYCTKQ8IVS8 523 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 FAM71AQ8IYT1 594 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 SMRP1Q8NCR6 262 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 SLC30A5Q8TAD4 765 aa10.25□□□□□ -0.77
NDE1-208ENST00000573694 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms