RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SPATA18Q8TC71 538 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 TATDN2Q93075 761 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 KLHL5Q96PQ7 755 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 OXCT2Q9BYC2 517 aaPredicted RBP15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 INTS2Q9H0H0 1204 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 IGFLR1Q9H665 355 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 APOBEC3GQ9HC16 384 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 DDX43Q9NXZ2 648 aaKnown RBP15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 FNIP2Q9P278 1114 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 MTRRQ9UBK8 725 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 BACE2Q9Y5Z0 518 aa15.54■□□□□ 0.08
NPLOC4-209ENST00000572760 OR6C75A6NL08 312 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 PER2O15055 1255 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 TEX28O15482 410 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 LILRB3O75022 631 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 CNPP09543 421 aaKnown RBP15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 FAM163BP0C2L3 166 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 OR1D2P34982 312 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 GNL1P36915 607 aaPredicted RBP15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 NRIP1P48552 1158 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 NDUFV1P49821 464 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 CDH8P55286 799 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 TSPY1Q01534 308 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 UBXN1Q04323 297 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 TCEAL5Q5H9L2 206 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 ADGRD2Q7Z7M1 963 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 PPFIBP1Q86W92 1011 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 DNAI2Q9GZS0 605 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 SMYD3Q9H7B4 428 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 CYP3A43Q9HB55 503 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 RXFP1Q9HBX9 757 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 FBXL5Q9UKA1 691 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 CDY1Q9Y6F8 540 aa15.53■□□□□ 0.08
NPLOC4-209ENST00000572760 LRRC10BA6NIK2 292 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 LGALS16A8MUM7 142 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 A8MXQ7 604 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 TACC1O75410 805 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 PDGFRBP09619 1106 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 WEE2P0C1S8 567 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 CPB1P15086 417 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 CD58P19256 250 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 TRIM21P19474 475 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 SLC9A1P19634 815 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 WARSP23381 471 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 TBXAS1P24557 533 aaPredicted RBP15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 PCSK1P29120 753 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 RAP1GAPP47736 663 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 YWHAEP62258 255 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 PALB2Q86YC2 1186 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 PPM1KQ8N3J5 372 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 PPM1EQ8WY54 764 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 FAXDC2Q96IV6 333 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 CDCA3Q99618 268 aaPredicted RBP15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 CLSTN3Q9BQT9 956 aa15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 MRPL45Q9BRJ2 306 aaKnown RBP15.52■□□□□ 0.08
NPLOC4-209ENST00000572760 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 CLASP2O75122 1294 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 ACAT1P24752 427 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 PON1P27169 355 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 ASPAP45381 313 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 FANCCQ00597 558 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 CUL2Q13617 745 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 CCDC85BQ15834 202 aaPredicted RBP15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 DUSP6Q16828 381 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 TRIM65Q6PJ69 517 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 EP400NLQ6ZTU2 488 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 RRAGAQ7L523 313 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 OSTM1Q86WC4 334 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 DCP1BQ8IZD4 617 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 TTC39CQ8N584 583 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 LMO3Q8TAP4 145 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 KBTBD7Q8WVZ9 684 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 FAM81BQ96LP2 452 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 ACBD6Q9BR61 282 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 LSM14BQ9BX40 385 aaKnown RBP15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 BCO2Q9BYV7 579 aa15.51■□□□□ 0.07
NPLOC4-209ENST00000572760 CHD9Q3L8U1 2897 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 BRWD1Q9NSI6 2320 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 GABRDO14764 452 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 GLUD1P00367 558 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 TPM3P06753 285 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 SRGAP2BP0DMP2 458 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 ELF1P32519 619 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 UBASH3AP57075 661 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 ROR1Q01973 937 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 SKIV2LQ15477 1246 aaKnown RBP15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 SLC8B1Q6J4K2 584 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 LLGL2Q6P1M3 1020 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 ELMSAN1Q6PJG2 1045 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 RSPO2Q6UXX9 243 aaPredicted RBP15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 LIMS2Q7Z4I7 341 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 SYT15Q9BQS2 421 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 SDCBP2Q9H190 292 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 UBE2TQ9NPD8 197 aaPredicted RBP15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 CDH9Q9ULB4 789 aa15.5■□□□□ 0.07
NPLOC4-209ENST00000572760 STXBP5LQ9Y2K9 1186 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms