RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 TNNC2P02585 160 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 SRFP11831 508 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 AVPR2P30518 371 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 ALDH1A3P47895 512 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 BMT2Q1RMZ1 405 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 PRSS36Q5K4E3 855 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 POTEHQ6S545 545 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 PDCL2Q8N4E4 241 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 XXYLT1Q8NBI6 393 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 CXorf38Q8TB03 319 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 ZCWPW1Q9H0M4 648 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 KIAA1586Q9HCI6 787 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 R3HCC1Q9Y3T6 440 aaKnown RBP19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 SNX9Q9Y5X1 595 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 TECTAO75443 2155 aa19.15■□□□□ 0.66
CTDNEP1-207ENST00000572043 STK25O00506 426 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 RPN1P04843 607 aaKnown RBP19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 PLA2G5P39877 138 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 EPHB3P54753 998 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 SURF1Q15526 300 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 DUOXA2Q1HG44 320 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 MGAT5BQ3V5L5 792 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 MTSS1LQ765P7 747 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 LRRTM3Q86VH5 581 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 LRRC52Q8N7C0 313 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 FAM200AQ8TCP9 573 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 GPR152Q8TDT2 470 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 FNBP1Q96RU3 617 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 DNAJC25Q9H1X3 360 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 ASAH2Q9NR71 780 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 L1RE1Q9UN81 338 aa19.14■□□□□ 0.65
CTDNEP1-207ENST00000572043 A0A1W2PQ27 194 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 A0A1W2PQ64 194 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 A0A1W2PQD8 194 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 ZNF197O14709 1029 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 EXOC3O60645 756 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 HUS1O60921 280 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 TNNI1P19237 187 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 ACAT1P24752 427 aaKnown RBP19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 GPC5P78333 572 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 CYP24A1Q07973 514 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 PLD1Q13393 1074 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 WDR49Q8IV35 697 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 TMEM105Q8N8V8 129 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 PRSS33Q8NF86 280 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 LPIN3Q9BQK8 851 aa19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 AVENQ9NQS1 362 aaPredicted RBP19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 DDX43Q9NXZ2 648 aaKnown RBP19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 ABI2Q9NYB9 513 aaPredicted RBP19.13■□□□□ 0.65
CTDNEP1-207ENST00000572043 MTCL1Q9Y4B5 1905 aaKnown RBP19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 FAM237AA0A1B0GTK4 181 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 KRBA1A5PL33 1030 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 HCRTO43612 131 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 RFX1P22670 979 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 SNRPFP62306 86 aaKnown RBP19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 PSMD6Q15008 389 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 TEAD2Q15562 447 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 CWF19L1Q69YN2 538 aaKnown RBP19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 KRBA2Q6ZNG9 492 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 OSTM1Q86WC4 334 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 HPDLQ96IR7 371 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 ZSWIM3Q96MP5 696 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 TMLHEQ9NVH6 421 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 GDE1Q9NZC3 331 aa19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 ARIH1Q9Y4X5 557 aaPredicted RBP19.12■□□□□ 0.65
CTDNEP1-207ENST00000572043 A0A1W2PRU2 124 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 MOSPD3O75425 235 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 ZNF202O95125 648 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 NPR3P17342 541 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 CASP4P49662 377 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 NUCB2P80303 420 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 MYO1EQ12965 1108 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 PSMD2Q13200 908 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 ASTLQ6HA08 431 aaPredicted RBP19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 TANGO2Q6ICL3 276 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 TRAPPC11Q7Z392 1133 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 TMC8Q8IU68 726 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 DCP1BQ8IZD4 617 aaKnown RBP19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 ADGRF2Q8IZF7 708 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 GIPC2Q8TF65 315 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 CGRRF1Q99675 332 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 PLA2G2FQ9BZM2 168 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 SLITRK6Q9H5Y7 841 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 WNT16Q9UBV4 365 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 MAPK8IP1Q9UQF2 711 aa19.11■□□□□ 0.65
CTDNEP1-207ENST00000572043 PI15O43692 258 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 MYL1P05976 194 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 TSPY1Q01534 308 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 DPYDQ12882 1025 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 CCDC142Q17RM4 750 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 SOWAHAQ2M3V2 549 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 FAM78AQ5JUQ0 283 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 DNAJB7Q7Z6W7 309 aaPredicted RBP19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 GPIHBP1Q8IV16 184 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 C12orf56Q8IXR9 622 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 GOLGA5Q8TBA6 731 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 SHKBP1Q8TBC3 707 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 CCDC47Q96A33 483 aaKnown RBP19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 PI4K2AQ9BTU6 479 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 ZNF334Q9HCZ1 680 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms