RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 CUL2Q13617 745 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 EAPPQ56P03 285 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 CAPRIN2Q6IMN6 1127 aaKnown RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 ALLCQ8N6M5 410 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 TTC8Q8TAM2 541 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 SPIRE2Q8WWL2 714 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 SENP7Q9BQF6 1050 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 SAE1Q9UBE0 346 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 GOLGA8RI6L899 631 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 SGK1O00141 431 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 ENTPD5O75356 428 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 SMNDC1O75940 238 aaKnown RBP eCLIP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 TJP3O95049 919 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 C4BPAP04003 597 aaKnown RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 GARTP22102 1010 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 GCKP35557 465 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 OVGP1Q12889 678 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 DLGAP5Q15398 846 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 CEP128Q6ZU80 1094 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 PAXIP1Q6ZW49 1069 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 TDRPQ86YL5 185 aa18.43■□□□□ 0.54
SCARF1-205ENST00000571272 RBBP8NLQ8NC74 664 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF75CPQ92670 426 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 KLF6Q99612 283 aaPredicted RBP18.43■□□□□ 0.54
SCARF1-205ENST00000571272 CNTNAP1P78357 1384 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 TYROBPO43914 113 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 RAD17O75943 681 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 GNAZP19086 355 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 SFNP31947 248 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 PEX19P40855 299 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 CCNHP51946 323 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 KRT76Q01546 638 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 WDR72Q3MJ13 1102 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 MTDHQ86UE4 582 aaKnown RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 RCOR2Q8IZ40 523 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 SAMD3Q8N6K7 520 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 PDCD2LQ9BRP1 358 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 MOV10L1Q9BXT6 1211 aaKnown RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 ALG13Q9NP73 1137 aaKnown RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 PARVAQ9NVD7 372 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 CYP39A1Q9NYL5 469 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 PCDHA10Q9Y5I2 948 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 NUMBLQ9Y6R0 609 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 SCINQ9Y6U3 715 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 H0YIN7 160 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 TPBGLP0DKB5 382 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 ADRA1DP25100 572 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 SSTR1P30872 391 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 CCNG1P51959 295 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 MAPK6Q16659 721 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 PLEKHG4Q58EX7 1191 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 MEX3CQ5U5Q3 659 aaKnown RBP18.42■□□□□ 0.54
SCARF1-205ENST00000571272 SWSAP1Q6NVH7 229 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 NLRP9Q7RTR0 991 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 STK32AQ8WU08 396 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 XPNPEP1Q9NQW7 623 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 ZFP69BQ9UJL9 534 aa18.42■□□□□ 0.54
SCARF1-205ENST00000571272 ALOX15BO15296 676 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 EXTL3O43909 919 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 DYNLT1P63172 113 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 ZBTB41Q5SVQ8 909 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 RNASEH2BQ5TBB1 312 aaKnown RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 ARHGEF16Q5VV41 709 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 NAIF1Q69YI7 327 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 RGS9BPQ6ZS82 235 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 CENPUQ71F23 418 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 PHF13Q86YI8 300 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 INPP5DQ92835 1189 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 RBM41Q96IZ5 413 aaKnown RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 MCEEQ96PE7 176 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 SEPT9Q9UHD8 586 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 LRRD1A4D1F6 860 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 GPX6P59796 221 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF252P-AS1Q0IIN9 211 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 BLMHQ13867 455 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 TFDP1Q14186 410 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 MORF4L2Q15014 288 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 SEZ6Q53EL9 994 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 SPOCD1Q6ZMY3 1216 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 SUPT20HQ8NEM7 779 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 LBHD1Q9BQE6 289 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 DENND2DQ9H6A0 471 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 PSMC3IPQ9P2W1 217 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-205ENST00000571272 IP6K2Q9UHH9 426 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 NUB1Q9Y5A7 615 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
SCARF1-205ENST00000571272 SEPT7Q16181 437 aaKnown RBP18.4■□□□□ 0.54
SCARF1-205ENST00000571272 POLR3FQ9H1D9 316 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-205ENST00000571272 SENP1Q9P0U3 644 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 ATP2A1O14983 1001 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 PSMD6Q15008 389 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 ZNF394Q53GI3 561 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 TRIM72Q6ZMU5 477 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 VCPIP1Q96JH7 1222 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 PXMP2Q9NR77 195 aa18.4■□□□□ 0.54
SCARF1-205ENST00000571272 AGO2Q9UKV8 859 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms