RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 DPH6Q7L8W6 267 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 LIMS2Q7Z4I7 341 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 SLC47A2Q86VL8 602 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 OR6B3Q8NGW1 331 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 KBTBD7Q8WVZ9 684 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 SUSD3Q96L08 255 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ZNF558Q96NG5 402 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 PRO3102Q9H379 93 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 PUF60Q9UHX1 559 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ADAM28Q9UKQ2 775 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 BZW2Q9Y6E2 419 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 A8MXQ7 604 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 NT5C1B-RDH14C9J2C7 533 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 M0QZQ0 153 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ARHGAP6O43182 974 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 TRAPPC3O43617 180 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 CALCAP01258 141 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 LAG3P18627 525 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 GNA15P30679 374 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ALDH7A1P49419 539 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 HTRA4P83105 476 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 C9orf50Q5SZB4 431 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 RASIP1Q5U651 963 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 OSTM1Q86WC4 334 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 TMEM86AQ8N2M4 240 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 EPS8L1Q8TE68 723 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 WHAMMQ8TF30 809 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 SLC20A1Q8WUM9 679 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 NHEJ1Q9H9Q4 299 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 ACP6Q9NPH0 428 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 DSEQ9UL01 958 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 PCDHB8Q9UN66 801 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 TIMM13Q9Y5L4 95 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 PTPRSQ13332 1948 aa16.45■□□□□ 0.22
HERPUD1-219ENST00000570273 SF3B1O75533 1304 aaKnown RBP eCLIP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 SSU72P8A0A1W2PR75 194 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 TLL1O43897 1013 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 FAM163BP0C2L3 166 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 CD19P15391 556 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 CYP11B1P15538 503 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 CYLC1P35663 651 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 RAD23BP54727 409 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 TAF3Q5VWG9 929 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 KCNT2Q6UVM3 1135 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 RAD9BQ6WBX8 426 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 ZNF571Q7Z3V5 609 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 NOP9Q86U38 636 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 VPS36Q86VN1 386 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 UNC93AQ86WB7 457 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 FIBCD1Q8N539 461 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 COLGALT1Q8NBJ5 622 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 BCL7CQ8WUZ0 217 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 TMEM176AQ96HP8 235 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 CCDC42Q96M95 316 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 DNAI2Q9GZS0 605 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 SEPT11Q9NVA2 429 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 NOCTQ9UK39 431 aaKnown RBP16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 INSL6Q9Y581 213 aa16.44■□□□□ 0.22
HERPUD1-219ENST00000570273 CARNS1A5YM72 827 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 THAP12O43422 761 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 AKR1B10O60218 316 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 CYP11A1P05108 521 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 PAEPP09466 180 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 TYMPP19971 482 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 ANXA13P27216 316 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 GNL1P36915 607 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 ELAVL2Q12926 359 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 MTF1Q14872 753 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 FUT10Q6P4F1 479 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 TMEM173Q86WV6 379 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 CCDC170Q8IYT3 715 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 SLC4A11Q8NBS3 891 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 SPATA18Q8TC71 538 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 RAD9AQ99638 391 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 AGPAT1Q99943 283 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 GDF15Q99988 308 aa16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 UBE2OQ9C0C9 1292 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-219ENST00000570273 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 SYN3O14994 580 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 HCRTO43612 131 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 PDGFRBP09619 1106 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 TKTP29401 623 aaKnown RBP16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 LHX1P48742 406 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 KIF11P52732 1056 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 CDR2Q01850 454 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 SHHQ15465 462 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 ACOT1Q86TX2 421 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 ZNF677Q86XU0 584 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
HERPUD1-219ENST00000570273 DPEP3Q9H4B8 488 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms