RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TUFMP49411 452 aaKnown RBP18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 EPHB3P54753 998 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SURF1Q15526 300 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 FAM78AQ5JUQ0 283 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 UNC13DQ70J99 1090 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 THEM5Q8N1Q8 247 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PJA1Q8NG27 643 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SPPL2BQ8TCT7 592 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SMARCD2Q92925 531 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 E2F7Q96AV8 911 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 DHX58Q96C10 678 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PGLYRP2Q96PD5 576 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 KIAA1586Q9HCI6 787 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ZFP14Q9HCL3 533 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 GDAP2Q9NXN4 497 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SIT1Q9Y3P8 196 aa18.43■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PVALEFA0A1B0GWK0 134 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 KANSL1LA0AUZ9 987 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 NRG2O14511 850 aaPredicted RBP18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 WEE1P30291 646 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 MAGEA9P43362 315 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ASIC1P78348 528 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 BMT2Q1RMZ1 405 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SLC44A4Q53GD3 710 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 FAM26FQ5R3K3 315 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TANGO2Q6ICL3 276 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ITIH5Q86UX2 942 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 HS6ST3Q8IZP7 471 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TMEM86AQ8N2M4 240 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ATAD1Q8NBU5 361 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SHKBP1Q8TBC3 707 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 DEPDC1BQ8WUY9 529 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 LEO1Q8WVC0 666 aaPredicted RBP18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TMEM209Q96SK2 561 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PLA2G2FQ9BZM2 168 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 FAM13BQ9NYF5 915 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TICRRQ7Z2Z1 1910 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 CACNA1IQ9P0X4 2223 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 DMDP11532 3685 aa18.42■□□□□ 0.54
MAP1LC3B-208ENST00000570189 POLR2DO15514 142 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ME1P48163 572 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 MLLT6P55198 1093 aaPredicted RBP18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TFAMQ00059 246 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PKP1Q13835 747 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ANGPT1Q15389 498 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SLC39A12Q504Y0 691 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 WSCD1Q658N2 575 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 LIMS2Q7Z4I7 341 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 GLIS3Q8NEA6 775 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 CGNQ9P2M7 1197 aaKnown RBP18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ZMYM5Q9UJ78 669 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PTPRDP23468 1912 aa18.41■□□□□ 0.54
MAP1LC3B-208ENST00000570189 F5P12259 2224 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ZNF233A6NK53 670 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TGFB1I1O43294 461 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ITGB3P05106 788 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 MYL4P12829 197 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PSMC3P17980 439 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 RFX1P22670 979 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 POLR2BP30876 1174 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SNW1Q13573 536 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 DNAJB7Q7Z6W7 309 aaPredicted RBP18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 C12orf56Q8IXR9 622 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 DCP1BQ8IZD4 617 aaKnown RBP18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TTC9BQ8N6N2 239 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TOP6BLQ8N6T0 577 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ST13P5Q8NFI4 369 aaPredicted RBP18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 TMEM174Q8WUU8 243 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ZSWIM3Q96MP5 696 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 NELL2Q99435 816 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ACBD6Q9BR61 282 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PCIF1Q9H4Z3 704 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 PDE11AQ9HCR9 933 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 ABCB6Q9NP58 842 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 FAM86C1Q9NVL1 165 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 INTS13Q9NVM9 706 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 HSPBP1Q9NZL4 362 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 SIX4Q9UIU6 781 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 AGAP1Q9UPQ3 857 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 COL4A3Q01955 1670 aa18.4■□□□□ 0.54
MAP1LC3B-208ENST00000570189 GREB1Q4ZG55 1949 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GOLGA8IPA6NC78 632 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GOLGA8JA6NMD2 632 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 STK25O00506 426 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ATF6P18850 670 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 RBP5P82980 135 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 TEAD2Q15562 447 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 NFE2Q16621 373 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 VITQ6UXI7 678 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 GAREM2Q75VX8 874 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 DPH6Q7L8W6 267 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 LRRTM3Q86VH5 581 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 WDR49Q8IV35 697 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 MFSD6LQ8IWD5 586 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 PDCL2Q8N4E4 241 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 ZSCAN18Q8TBC5 510 aaPredicted RBP18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 SCFD1Q8WVM8 642 aa18.39■□□□□ 0.53
MAP1LC3B-208ENST00000570189 IRF7Q92985 503 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms