RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MAPK13O15264 365 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 GBP2P32456 591 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 PRCPP42785 496 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 CLDN10P78369 228 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 ADAM9Q13443 819 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 EDRF1Q3B7T1 1238 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 TOP6BLQ8N6T0 577 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 OR10T2Q8NGX3 314 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 PLEKHO2Q8TD55 490 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 PGLYRP2Q96PD5 576 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 TMEM209Q96SK2 561 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 RTP3Q9BQQ7 232 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 ZCWPW1Q9H0M4 648 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 DNMT3BQ9UBC3 853 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 L1RE1Q9UN81 338 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 INSL5Q9Y5Q6 135 aa14.85□□□□□ -0.03
HERPUD1-218ENST00000569569 TECTAO75443 2155 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 MTMR11A4FU01 709 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 LRRIQ3A6PVS8 624 aaPredicted RBP14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 N4BP1O75113 896 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 PHACTR2O75167 634 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 VNN2O95498 520 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 PTPN2P17706 415 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 FSHRP23945 695 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 LHX1P48742 406 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 MYL7Q01449 175 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 SMARCB1Q12824 385 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 DUSP4Q13115 394 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 TRPC3Q13507 836 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 ZCWPW2Q504Y3 356 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 CENPPQ6IPU0 288 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 DCP1BQ8IZD4 617 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 ELMOD1Q8N336 334 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 TMC2Q8TDI7 906 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 ACBD6Q9BR61 282 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 HSFX1Q9UBD0 423 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 TRIOO75962 3097 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 DENND4CQ5VZ89 1909 aa14.84□□□□□ -0.03
HERPUD1-218ENST00000569569 IKBKBO14920 756 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 C4BPAP04003 597 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 ATICP31939 592 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 PSMC2P35998 433 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 NTHL1P78549 312 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 TSPY1Q01534 308 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 TWF1Q12792 350 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 PTPN21Q16825 1174 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 SOWAHAQ2M3V2 549 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 PABPC1LQ4VXU2 614 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 SLC39A12Q504Y0 691 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 INTS8Q75QN2 995 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 GET4Q7L5D6 327 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 LIMS2Q7Z4I7 341 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 ATAD1Q8NBU5 361 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 C2orf15Q8WU43 125 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 EDAQ92838 391 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 ZNF512Q96ME7 567 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 MYADMQ96S97 322 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 AVENQ9NQS1 362 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 HCFC1R1Q9NWW0 138 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 DDX43Q9NXZ2 648 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 EPS15L1Q9UBC2 864 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 MAN1B1Q9UKM7 699 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 ZFP37Q9Y6Q3 630 aaPredicted RBP14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 MYH10P35580 1976 aa14.83□□□□□ -0.04
HERPUD1-218ENST00000569569 PTPRDP23468 1912 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ZNF638Q14966 1978 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 GABRDO14764 452 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 CETN3O15182 167 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 GPR37L1O60883 481 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 AKAP3O75969 853 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 STAU1O95793 577 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 RHOP08100 348 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 FAM163BP0C2L3 166 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 LAMP2P13473 410 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 KRT13P13646 458 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 PPP1R2P41236 205 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ALDH1A3P47895 512 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 TUFMP49411 452 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 VAMP7P51809 220 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 DLG4P78352 724 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ZXDAP98168 799 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ENPEPQ07075 957 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 PLD1Q13393 1074 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 BIRC3Q13489 604 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 STIM1Q13586 685 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 WDR72Q3MJ13 1102 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 TDRD10Q5VZ19 366 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ISM2Q6H9L7 571 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 IQCEQ6IPM2 695 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 CLEC17AQ6ZS10 378 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 LRRTM3Q86VH5 581 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 FAM186BQ8IYM0 893 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ADGRF2Q8IZF7 708 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 ADSSL1Q8N142 457 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 SPPL2BQ8TCT7 592 aa14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 SYAP1Q96A49 352 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-218ENST00000569569 IPO9Q96P70 1041 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms