RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CRACR2AQ9BSW2 395 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 TTPALQ9BTX7 342 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 HSD3B7Q9H2F3 369 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.345e-9■■■■■ 51.3
USB1-215ENST00000569252 MARCH5Q9NX47 278 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 GDAP2Q9NXN4 497 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 PCDHB8Q9UN66 801 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 TRIP11Q15643 1979 aa17.18■□□□□ 0.34
USB1-215ENST00000569252 LGALS16A8MUM7 142 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 H7C4K7 107 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 CXCL14O95715 111 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 SOD2P04179 222 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 ITGB1P05556 798 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 URODP06132 367 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 YWHAEP62258 255 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 NOP14P78316 857 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 CTC1Q2NKJ3 1217 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 PDE12Q6L8Q7 609 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 TMEM86AQ8N2M4 240 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 TMEM130Q8N3G9 435 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 TTC39CQ8N584 583 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 TOP6BLQ8N6T0 577 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 SPPL3Q8TCT6 385 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 FAXDC2Q96IV6 333 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 GPR62Q9BZJ7 368 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 INTS2Q9H0H0 1204 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 LMAN2LQ9H0V9 348 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 SNX25Q9H3E2 840 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 NGRNQ9NPE2 291 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
USB1-215ENST00000569252 MRPL17Q9NRX2 175 aaKnown RBP17.17■□□□□ 0.34
USB1-215ENST00000569252 USP34Q70CQ2 3546 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 F8W810 466 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 I3L4J1 428 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 M0QZQ0 153 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 FAM163BP0C2L3 166 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 TBXAS1P24557 533 aaPredicted RBP17.16■□□□□ 0.34
USB1-215ENST00000569252 LHX1P48742 406 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 GLUD2P49448 558 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 CREMQ03060 361 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 YWHAHQ04917 246 aaPredicted RBP17.16■□□□□ 0.34
USB1-215ENST00000569252 LRMPQ12912 555 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 IER5LQ5T953 404 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 TMEM173Q86WV6 379 aaPredicted RBP17.16■□□□□ 0.34
USB1-215ENST00000569252 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 RNF135Q8IUD6 432 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 CXorf38Q8TB03 319 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 SEMA4DQ92854 862 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 OXCT2Q9BYC2 517 aaPredicted RBP17.16■□□□□ 0.34
USB1-215ENST00000569252 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
USB1-215ENST00000569252 TLR9Q9NR96 1032 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 IFNKQ9P0W0 207 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 ZDBF2Q9HCK1 2354 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 ANK1P16157 1881 aa17.16■□□□□ 0.34
USB1-215ENST00000569252 C2CD2LO14523 706 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 SPTLC1O15269 473 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 TYMPP19971 482 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 AARSP49588 968 aaKnown RBP eCLIP17.15■□□□□ 0.34
USB1-215ENST00000569252 SMC1AQ14683 1233 aaKnown RBP17.15■□□□□ 0.34
USB1-215ENST00000569252 NR1I3Q14994 352 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 SMAD2Q15796 467 aaKnown RBP17.15■□□□□ 0.34
USB1-215ENST00000569252 PUS10Q3MIT2 529 aaKnown RBP17.15■□□□□ 0.34
USB1-215ENST00000569252 OVOS1Q6IE37 1185 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 SPOPLQ6IQ16 392 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 ANKS3Q6ZW76 656 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 ENOSF1Q7L5Y1 443 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 RBM23Q86U06 439 aaKnown RBP17.15■□□□□ 0.34
USB1-215ENST00000569252 PPM1KQ8N3J5 372 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 PRSS33Q8NF86 280 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 NEK11Q8NG66 645 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
USB1-215ENST00000569252 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 TCF25Q9BQ70 676 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 HERC2P3Q9BVR0 1158 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 NIF3L1Q9GZT8 377 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 XYLT2Q9H1B5 865 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 CYP3A43Q9HB55 503 aa17.15■□□□□ 0.34
USB1-215ENST00000569252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.15■□□□□ 0.34
USB1-215ENST00000569252 PLXNA4Q9HCM2 1894 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 A0A1B0GTH6 734 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 SLC9A1P19634 815 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 FGFR3P22607 806 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 PON1P27169 355 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 TKTP29401 623 aaKnown RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 GNL1P36915 607 aaPredicted RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 MFAP3P55082 362 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 CD300LGQ6UXG3 332 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 TAS1R1Q7RTX1 841 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 SPATA18Q8TC71 538 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 TATDN2Q93075 761 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 NAP1L5Q96NT1 182 aaPredicted RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 LSM14BQ9BX40 385 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms