RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PARVGQ9HBI0 331 aa16.83■□□□□ 0.28
NME3-211ENST00000568561 C2orf42Q9NWW7 574 aa16.83■□□□□ 0.28
NME3-211ENST00000568561 GTSE1Q9NYZ3 720 aa16.83■□□□□ 0.28
NME3-211ENST00000568561 CPSF3Q9UKF6 684 aaKnown RBP16.83■□□□□ 0.28
NME3-211ENST00000568561 CHD8Q9HCK8 2581 aa16.83■□□□□ 0.28
NME3-211ENST00000568561 SDK1Q7Z5N4 2213 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 CHURC1-FNTBB4DL54 471 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 CHADO15335 359 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 UBA7P41226 1012 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 CXCL12P48061 93 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 FNTBP49356 437 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 ACOT2P49753 483 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 ZNF131P52739 623 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 ATXN1P54253 815 aaKnown RBP16.82■□□□□ 0.28
NME3-211ENST00000568561 MYBPC2Q14324 1141 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 TMEM132DQ14C87 1099 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 RABEP1Q15276 862 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 KYAT1Q16773 422 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 ZC2HC1CQ53FD0 456 aaPredicted RBP16.82■□□□□ 0.28
NME3-211ENST00000568561 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
NME3-211ENST00000568561 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 KCTD17Q8N5Z5 321 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 RASSF8Q8NHQ8 419 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 FAM200AQ8TCP9 573 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 PSMG2Q969U7 264 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 CALML4Q96GE6 196 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
NME3-211ENST00000568561 OXCT2Q9BYC2 517 aaPredicted RBP16.82■□□□□ 0.28
NME3-211ENST00000568561 SMG9Q9H0W8 520 aaKnown RBP16.82■□□□□ 0.28
NME3-211ENST00000568561 CDV3Q9UKY7 258 aaKnown RBP16.82■□□□□ 0.28
NME3-211ENST00000568561 DCDC2BA2VCK2 349 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 SPECC1L-ADORA2AF8WAN1 911 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 DPYSL4O14531 572 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 TRAK2O60296 914 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 TBCAO75347 108 aaKnown RBP16.81■□□□□ 0.28
NME3-211ENST00000568561 ADRB2P07550 413 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 ATF6P18850 670 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 CTHP32929 405 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 NRLP54845 237 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 LMNB2Q03252 620 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 TNK2Q07912 1038 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 PPP2R5DQ14738 602 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 PON2Q15165 354 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 GPR161Q8N6U8 529 aaKnown RBP16.81■□□□□ 0.28
NME3-211ENST00000568561 RAD54LQ92698 747 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 KCNN1Q92952 543 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 E2F7Q96AV8 911 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 AK8Q96MA6 479 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 IER2Q9BTL4 223 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 RAB23Q9ULC3 237 aa16.81■□□□□ 0.28
NME3-211ENST00000568561 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.81■□□□□ 0.28
NME3-211ENST00000568561 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
NME3-211ENST00000568561 SPAG17Q6Q759 2223 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 PIRO00625 290 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 LRRC32Q14392 662 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 MGAT5BQ3V5L5 792 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 LAIR1Q6GTX8 287 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 MAMSTRQ6ZN01 415 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 SPEM1Q8N4L4 309 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 STKLD1Q8NE28 680 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 GIPC2Q8TF65 315 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 PYM1Q9BRP8 204 aaKnown RBP16.8■□□□□ 0.28
NME3-211ENST00000568561 ZCWPW1Q9H0M4 648 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 IL21Q9HBE4 155 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 ASB3Q9Y575 518 aa16.8■□□□□ 0.28
NME3-211ENST00000568561 ANO9A1A5B4 782 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 K7ESF4 209 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 TULP1O00294 542 aaPredicted RBP16.79■□□□□ 0.28
NME3-211ENST00000568561 HRO43593 1189 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 SIM2Q14190 667 aaPredicted RBP16.79■□□□□ 0.28
NME3-211ENST00000568561 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 ARHGAP15Q53QZ3 475 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 ITIH5Q86UX2 942 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 FAM84AQ96KN4 292 aa16.79■□□□□ 0.28
NME3-211ENST00000568561 C8orf33Q9H7E9 229 aaPredicted RBP16.79■□□□□ 0.28
NME3-211ENST00000568561 MAP1BP46821 2468 aaKnown RBP16.79■□□□□ 0.28
NME3-211ENST00000568561 MYBPHLA2RUH7 354 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 PRR5-ARHGAP8B1AHC4 643 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 CYB561D2O14569 222 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 CYP11A1P05108 521 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 MLLT6P55198 1093 aaPredicted RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 GTF2BQ00403 316 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 VEPH1Q14D04 833 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 WSCD1Q658N2 575 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 LRRTM3Q86VH5 581 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 RALGPS2Q86X27 583 aaPredicted RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 SFR1Q86XK3 245 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 CD302Q8IX05 232 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 CELF5Q8N6W0 485 aaKnown RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 BPIFB1Q8TDL5 484 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 LARP4BQ92615 738 aaKnown RBP16.78■□□□□ 0.28
NME3-211ENST00000568561 MSANTD3Q96H12 275 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 TSPAN18Q96SJ8 248 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 TASP1Q9H6P5 420 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 DPP3Q9NY33 737 aa16.78■□□□□ 0.28
NME3-211ENST00000568561 ABI2Q9NYB9 513 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms